| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2712 |
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| Symbol | |
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| ID | 4279618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3257190 |
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| End bp | 3258725 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135517 |
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| Product | transcriptional regulator, AraC family protein |
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| Protein accession | YP_751391 |
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| Protein GI | 114563877 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCAGA TTAACAGTGA TTGTAATATT GCAGCACAGA TCTGCCAGCA AGCAAGGCTT
AGTCGTGATG CTCGCTTTGA TGGTCAATTT TTTACCGGAG TTATCACTAC TGGTATTTAT
TGCCGATCAA TTTGTCCCGC TCCTGCACCC TATGAAAAAA ATGTCCGTTA CTTTGATTCT
GCGATTAAAG CGGCTAATGT CGGACTTAGG CCTTGTCTTC GATGCCGGCC AGATAGTGCG
CCAAGTTCAT TTGCGTGGTT AGGTACTCAA ACTACGTTAA TGCGAGCGAT TACGTTAATT
GAGCAAGGCT ATTTAACTGG TGAGAATGCA GGGACGATCG TTAAATTAGC TGATAAGTTA
GGCATTACCA GTCGGTATTT AAATAAACTC TTTAACCAAG GTTTGGGGAC TTCGCCTAAA
CGTTTTGCGT TATATCAGCA ATTGATGTTT GCTAAGCAGT TATTACACCA AACACAATTA
TCAATGACCG AGGTCGCCAT GGCTGCTGGC TTTAATAGTA TCAGGCGGTT TAATGAAATT
TTTAAGCAAG AACTATTGTT AACACCTAGC GAATTACGCC AAAAGAGCCG ACATTCAACT
GATGTAACTC ATCCTTATAA AGATAATCAA GTGAGCACTA ACATTAAACC AATAACATTA
GCATTATCTT ACCGTCCCCC CTTTAATTGG GCGAAGATGT TGGCTTTTTA TGCATTTCGT
CAAGTTGATA ATATGGAAGT CATTGATGAT ATTTCGGGAC GGTATGGCCG AACCTTTTCG
TTTAATGGCG TAGAAGGTGT TTTTTACATT TCACCAAATG CCGATAAACC CCAACTTGAT
GTGAGTATTT ACTTAGCTGA TGCTAATGAT ATTAAGTCCT TGCATTATAT TACTCTGCAA
TTACGCCGTA TGTTTGATTT AGATGCTGAC ATGGAAGTCA TTCAGCAAGC TTTATCTCCC
ATCATTAAAT TAGGCGCCAA AATTGATAGT GGTTTACGTA TACCAGCGGC TGGCAGCGTT
TTTGAGGCCG CTTGCCGTGC CGTATTAGGG CAACAAGTCA GTGTAGTGCA AGCCACTAAA
CTATTAAATT TATTGGTTGA ATCTTATGGT GAAACGCTGT TCATCGATGG TAAGACTTGG
CAGTTATTTC CTACGGCACA AGCTATTGCT AACGCTTCAT TAGATGAACT TAAAATGCCA
GGAGCTCGAA AATTAGCCTT AAATGCCTTG GGGCAATTTG TGCATCAGCA TGCTGACTCA
ACACCTGACG ATTGGTTGTC TGTAAAAGGT ATTGGTCCAT GGACTGTTGC TTATGCGAAT
ATGCGAGGTT TGAGTGATCC TGATGTGTTT TTGAGTTCTG ATTTAGTTAT CAAAAATCGT
CTTCATGCAT TATATGAGCA ATCGGGTATA CCCATTGAAA CCCCTAAATC GTACATAAGC
ATTGCTGCCG ACATTGCAAC ACAAGCATCA CCTTGGGGCA GTTACTTAAC CTTCCAGCTT
TGGGATAACG ATCCTGTCGC TGCAAAAAAC GGATAA
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| Protein sequence | MVQINSDCNI AAQICQQARL SRDARFDGQF FTGVITTGIY CRSICPAPAP YEKNVRYFDS
AIKAANVGLR PCLRCRPDSA PSSFAWLGTQ TTLMRAITLI EQGYLTGENA GTIVKLADKL
GITSRYLNKL FNQGLGTSPK RFALYQQLMF AKQLLHQTQL SMTEVAMAAG FNSIRRFNEI
FKQELLLTPS ELRQKSRHST DVTHPYKDNQ VSTNIKPITL ALSYRPPFNW AKMLAFYAFR
QVDNMEVIDD ISGRYGRTFS FNGVEGVFYI SPNADKPQLD VSIYLADAND IKSLHYITLQ
LRRMFDLDAD MEVIQQALSP IIKLGAKIDS GLRIPAAGSV FEAACRAVLG QQVSVVQATK
LLNLLVESYG ETLFIDGKTW QLFPTAQAIA NASLDELKMP GARKLALNAL GQFVHQHADS
TPDDWLSVKG IGPWTVAYAN MRGLSDPDVF LSSDLVIKNR LHALYEQSGI PIETPKSYIS
IAADIATQAS PWGSYLTFQL WDNDPVAAKN G
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