| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2707 |
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| Symbol | |
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| ID | 4279613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3251637 |
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| End bp | 3252878 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135512 |
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| Product | serine/threonine transporter SstT |
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| Protein accession | YP_751386 |
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| Protein GI | 114563872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3633] Na+/serine symporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.419663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAA AAACATCACT GTTAGCTCGT ATCGCTAACG GTAGCCTCGT GCTACAAATT
ATCAGCGGAA TCATTTTGGG CGTGATTCTG GCAAGTATTT CAACAACAGG TGCCAACAAT
GTGGCTTTTT TGGGCTCACT TTTTGTGGGT GCTTTAAAAG CTATTGCGCC AATCCTGGTT
TTTGTTTTGG TTGCATCATC GATTGCCAAT CAAAAGAAAA ATAGCCAAAC CAATATGCGT
CCTATCATTG GGCTATATCT TCTGGGTACA TTTGTTGCTG CATTAACCGC AGTATTATTC
AGTTTTGCGT TTCCAACCAC TTTATTGCTA ACCACTGGGA TAGAGGGCAC CAATCCTCCT
CAAGGGATTA GTGAAGTTAT CAATACCTTA TTGTTCAAAA TTGTCGATAA CCCAGTTAAC
GCACTATTAA CGGGCAATTA CATTGGTATT TTGGTGTGGG GGGCTGGTCT TGGAATAACC
ATGCATCATG CCAGCGACAG CACTAAACGA ATGCTCTCAG ATGTCAGTGA TGCGGTGTCA
AATATTGTTC GCTTTGTGAT TCGTTTAGCG CCTATCGGTA TTTTTGGTTT AGTTGCGGCC
ACATTTGCTG AAACAGGTTT CGACGCTCTA GCGGGTTACG GCCAATTATT GATGGTACTT
GTGGGATCTA TGTTATTCAT TGCTTTGGTG ATTAACCCTA TTATCGTTTA TGTCAAAATT
AAGCGTAATC CTTATCCATT AGTATTTAAG TGTTTACGTG AAAGTGGTGT AACAGCCTTT
TTCACCCGTT CAAGTGCGGC CAATATTCCG GTCAACATGG CTTTGTGTGA AGAATTAAAA
CTGCATAAAG ACACTTATTC AGTGTCTATT CCATTAGGTG CCACCATTAA TATGGGCGGT
GCTGCGATTA CCATTACGGT ATTAACATTA GCAGCAGCTC ATACTTTGGG TATTCAAGTG
GACTTTATGA CAGCTCTGTT ATTGAGCGTG ATAGCGTCGG TTTCTGCTTG TGGTGCTTCA
GGTGTTGCCG GTGGTTCATT ATTATTAATC CCATTAGCGT GTAGTTTGTT TGGGATTTCT
AATGATGTTG CCATGCAAGT TGTGGCAGTT GGTTTTATTA TTGGTGTGAT TCAAGATTCA
GCCGAAACAG CACTAAATAG CTCTACAGAT GTTATCTTTA CTGCAGCAGC ATGTGAAGCT
GCTGAAGCTA AAGAGGCCAA GCAAGCCGCT CAAGTGAGTT AA
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| Protein sequence | MNQKTSLLAR IANGSLVLQI ISGIILGVIL ASISTTGANN VAFLGSLFVG ALKAIAPILV
FVLVASSIAN QKKNSQTNMR PIIGLYLLGT FVAALTAVLF SFAFPTTLLL TTGIEGTNPP
QGISEVINTL LFKIVDNPVN ALLTGNYIGI LVWGAGLGIT MHHASDSTKR MLSDVSDAVS
NIVRFVIRLA PIGIFGLVAA TFAETGFDAL AGYGQLLMVL VGSMLFIALV INPIIVYVKI
KRNPYPLVFK CLRESGVTAF FTRSSAANIP VNMALCEELK LHKDTYSVSI PLGATINMGG
AAITITVLTL AAAHTLGIQV DFMTALLLSV IASVSACGAS GVAGGSLLLI PLACSLFGIS
NDVAMQVVAV GFIIGVIQDS AETALNSSTD VIFTAAACEA AEAKEAKQAA QVS
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