Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2693 |
Symbol | |
ID | 4279599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3238906 |
End bp | 3239553 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638135498 |
Product | CBS domain-containing protein |
Protein accession | YP_751372 |
Protein GI | 114563858 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGTTTC ACGTTTCGCG ATGGTTGTTG ATTAAGGATG TTATTGTGAA GAAATTAGCC CTATACCCAG TAGAAAAAAT TGATGAACTA ACTTCACCAG AAGCTCATGA AGATATCTCA GTGTTATCCT CAGCATTAAA CGTGTTTACT GATTTTAAGA AAGTGACTCC TATGGTGATA GAATCGAGTA CGTCGGCAGT TAAGGTCGAG CACTTAATGC AGAAGTCGCA TGTACGTCTT AAATTAGTAA TAGATGATAA AGATCGGTTT ATTGGCCTAA TCAGCTTTGA GTCTTTACAT AATCAAGAGA TATTGAAACG TGTTGCCGCT GGGCATCAGC GTGATCATTT AAGTGTTGCA GATTTTATGA TCCCTAAAGA GGATCTGAAA GCGATTGATT TTGAAGATTT AAGTTATGCT CGTATTGGTG ATGTTATTGA GACATTACAA TCAGCAGGAC AGCAACATTG CTTAGTGGTT GACCGTTCAA ATCATGCCAT CCGTGGTGTG TTATCTGCTA ATGATATTGC TCGTCGATTA AAGCTAGCTG TCGATGTGAG TACGCCAAAC TCATTTGCAT CTATATTTGA AGTGATTGCC AATATTCAGC AGCCTGCCGT GTTGCAAACA ACACAACCTC ACTATTAG
|
Protein sequence | MMFHVSRWLL IKDVIVKKLA LYPVEKIDEL TSPEAHEDIS VLSSALNVFT DFKKVTPMVI ESSTSAVKVE HLMQKSHVRL KLVIDDKDRF IGLISFESLH NQEILKRVAA GHQRDHLSVA DFMIPKEDLK AIDFEDLSYA RIGDVIETLQ SAGQQHCLVV DRSNHAIRGV LSANDIARRL KLAVDVSTPN SFASIFEVIA NIQQPAVLQT TQPHY
|
| |