| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2692 |
|---|
| Symbol | |
|---|
| ID | 4279598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 3236368 |
|---|
| End bp | 3238824 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638135497 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_751371 |
|---|
| Protein GI | 114563857 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATA ATATGAAAAA GCATAAAAAC CCAACGGTCG TGCTTAGCAT GACAGCACTC
GCTTTGGCCA TTTCAACTCA AGTAAACGCA GCACCAGCCC CTTCTCAACT CTCTGCAACG
AATCAACAAA TTGAACAACA ATCACCTTTA CCTAAACGAT ATATCGTTAA GTTCAGAAAT
GATAATGCTG CACAGATACT CAATAGCAGT TCCGCTGTAC AAAATGTAAA TGCTGAAACG
GACAACAGTA TGGCTTACGA GCCTCCTTCA AACGAAGTAT TTACTCAATT TAGAGCCTTG
AATAGCGTAA AAGCACGAGA AATGAAGCGC GTAGGTCGCA GTAATAGTTA CTCGGTAAAG
CTCGACTCGT CTTCTATTAA AGCATTACGT TTGCGTCAAG ATGTTGAATA CGTGGAAGAG
GATTTACCCC GTAGACTGCT AGCAGAGACA ACACCTTGGG GACAAACCTT TGTAGGTGCG
ACTGTGTTAA GCGACAGCCA AGCAGGTAAC CGTACTATCT GTATTATTGA TTCTGGTTAT
GACCGCAGCC ACAATGATTT AAGTGGTAAC AATGCAACCG GGACCAATAA TTCAGGCACC
GGTAACTGGT ATCAACCAGG TAATAATAAT GCCCATGGTA CTCACGTAGC AGGTACCATT
GCCGCAATAG CAAATAACGA AGGTGTGGTC GGGGTTATGC CTAACCAGAA TGCCAATATT
CATGTTGTAA AAGTGTTTAA CGAAGCAGGA TGGGGCTACT CATCATCGTT AGTCGCTGCG
ATTGATACGT GTGTTACTTC AGGTGGTGCA AACGTAGTCA CAATGAGTTT AGGTGGCAGT
GGTTCAACCA CAACTGAGCG TAATGCATTA AATACTCATT ATAACAATGG GGTGTTATTA
ATTGCAGCTG CTGGTAATGC TGGCGACAGT AGTTATAGCT ACCCAGCATC TTATGATAGC
GTAATGTCTG TTGCCGCGGT TGACAGCAAT CTTGATCATG CTGCTTTTTC ACAATATACA
GACCAAGTTG AAATTTCAGG TCCTGGCGAG GCAATTCTAT CAACGGTTAC CGTTGGCGAA
GGTCGTTTAG CAGATATAAC TATTGGCGGT CAGTCTTACT TTAACAATGG TGTAGTGCCG
CACAATCGTT TAACCCCATC TGGTACTAGC TACACTGCTG CACCGATTAA CGCAAGTGCA
ACTGGAACCT TAGCGGAATG TACTGTAAAC GGAACCAGTT TTAATTGCGG TAGCATGACC
AATAAAATCT GTCTTGTTGA GCGTGTAGGT AACCAGGGTT CAAGTTACCC TGAAATAAAC
GCGGTTAAAG CCTGTAAAAC AGCTGGTGCC AAAGGAGTCA TTGTTTACAG TAACACTGCG
CTACCAGGGC TACAAAATCC ATTCGTCGTT GATGCTAACA GTGAAATTCT GATCCCTTCT
ATGTCTGTTG ACCGAGCAAC AGGGCTTGCA CTTAAAGCCA AGTTGGGTCA ATCAACCACT
GTGAGTAATC AAGGCAATCG AGATTATGAA TATTACAATG GCACCTCAAT GGCAACACCA
CATGTGTCGG GCGTAGCAAC ATTAGTGTGG AGTTACCACC CAGAATGTAG CGCCAGCCAA
GTACGTGCTG CATTAAATGC CACAGCAGAT GACTTAAGCG TTGCCGGTCG TGATAACCAA
ACAGGTTACG GGATGGTTAA TGCAACAGCA GCAAAGGCTT ACCTAGACGA ATCATGTAAT
GGTCCAACCG ATCCAGGTAC AGGCTCTGGT GACAGCGTAC TTGAAAAGGG CGTGGCAAAA
ACGGGCTTAG CTGGCGCTAA AAACGATGAA TTATATTTCT CGTTAGACGT TCCTGCAGGC
GCGACAGACT TAAGCTTCAC TATGAGTGGT GGCACTGGCG ATGCTGACTT ATATGTGCAG
TATGGCGCAT CACCTACCAG CAGCAGTTAC GACTGTCGTC CATGGAAAGG TGGTAATGCA
GAGTCTTGCC CAATTGCGAC GCCTCAATCT GGTACTTACT ATGTAATGCT ACAAGGTTAT
AGTGCATTTA GTGGTGTAAA TTTAGTGGCT AACTACACCG CTGGTAGCAC TGGAGGCAGC
AACACAGGCG GCCCAGCAAG CTACAACAAT ACCGGTAATT ATACAATTCC AGACAACAAC
ACTAGTGGTA TTACTAGCCC TATTACTGTT AGCCGCACTG GTGATTCAGG AACGGTATCG
GTGTCAATTG GGATTATTCA TACTTATATT GGTGATTTAA AAATCCAGTT AGTTAGCCCT
ACCGGCCAAA CGGTTGTACT GCATAACAAC ACTGGTGGTG GTACCGATAA TCTAACCCAG
ACTTACACCG CTAATATGGC AGGTGTCGAA TCAAGTGGTG TATGGACATT AAAAGCTGTT
GATAATGCGA GACAAGATAC TGGATATATT GATACTTGGA GCTTAAGCTT CCAGTAA
|
|---|
| Protein sequence | MEDNMKKHKN PTVVLSMTAL ALAISTQVNA APAPSQLSAT NQQIEQQSPL PKRYIVKFRN
DNAAQILNSS SAVQNVNAET DNSMAYEPPS NEVFTQFRAL NSVKAREMKR VGRSNSYSVK
LDSSSIKALR LRQDVEYVEE DLPRRLLAET TPWGQTFVGA TVLSDSQAGN RTICIIDSGY
DRSHNDLSGN NATGTNNSGT GNWYQPGNNN AHGTHVAGTI AAIANNEGVV GVMPNQNANI
HVVKVFNEAG WGYSSSLVAA IDTCVTSGGA NVVTMSLGGS GSTTTERNAL NTHYNNGVLL
IAAAGNAGDS SYSYPASYDS VMSVAAVDSN LDHAAFSQYT DQVEISGPGE AILSTVTVGE
GRLADITIGG QSYFNNGVVP HNRLTPSGTS YTAAPINASA TGTLAECTVN GTSFNCGSMT
NKICLVERVG NQGSSYPEIN AVKACKTAGA KGVIVYSNTA LPGLQNPFVV DANSEILIPS
MSVDRATGLA LKAKLGQSTT VSNQGNRDYE YYNGTSMATP HVSGVATLVW SYHPECSASQ
VRAALNATAD DLSVAGRDNQ TGYGMVNATA AKAYLDESCN GPTDPGTGSG DSVLEKGVAK
TGLAGAKNDE LYFSLDVPAG ATDLSFTMSG GTGDADLYVQ YGASPTSSSY DCRPWKGGNA
ESCPIATPQS GTYYVMLQGY SAFSGVNLVA NYTAGSTGGS NTGGPASYNN TGNYTIPDNN
TSGITSPITV SRTGDSGTVS VSIGIIHTYI GDLKIQLVSP TGQTVVLHNN TGGGTDNLTQ
TYTANMAGVE SSGVWTLKAV DNARQDTGYI DTWSLSFQ
|
|---|
| |