Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2688 |
Symbol | |
ID | 4279594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3230929 |
End bp | 3231990 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135493 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_751367 |
Protein GI | 114563853 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000261317 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGCT TATCTAATAA TTTATTCTTC GGCACCATTC TCGCAACAAC AGTACTAGCC ACAATAGTAT CTTATACAGC GCAAGCCTCT GATGTTGCAA CATTAAAACT AGTATATTCG GAACAATATC AGCCGCGTAT TTATGATGCA AAAATTGAAG CTATTAAAGC GGCAACAATT TCTGCACAAA CCTCAGGGCG GATCATTAAT ATTCATTTTG ATGTAAATGA CCTCGTCCCA CAGGGCGCTG CATTATTGGA GATTACCAAT AAAGAGCAAG GTGCAGGATA CGCGGGGGCA GAAGCTGATC TAGCTAAAGC TGAGGCGCTA AACAGTGAAG CACAAGCACA ATATCTTCGT TATAAAACAT TATTTCCCAA GGGCGCCATA TCAAAAGGTG CGATGGATGA AGCCACTGCC AAAGCAAAAT CCAGCAAACA AGCAGTCAGT GCCGCTCAAG CACAGTTAAT AAAGGCTAAA GAAAGTTTAA ATTACACTGT AGTAAGCGCA CCTTTTAGTG GCCGAATGAC CCAACGATTT ATCGAACAAG GTGAAACCAT ATCTTACGGC CAAGCGTTGT TCTCTGGCTA CGACACTCAA CACCTTAGAG CTGTATTTCA AATTCCTCAG CAAGATGTGG CTCAGGTGCA AAAACAAGAA CAAGTAAGCG TTCAATTGTT CAATGGCGAT AAAATCATTT CTAATGATAT TAACGTCTAT CAATTTGCCG ATCCGTTAAC TCATCAACAT CAAGTTAGAG TAAACATTGA TGCTAGTAAC ATTGAAGACG TCATAGTAGG TCAATGGATA AAAGTCATCG TTAACTTCCC TAGTCGAACG AGTTTAATGA TCCCATTATC GGCCATACAT CAAGTCAGTG ACTTAACGTC GGTATATCGT CAAATGGCAG ACAAAATAGT GCTTAACCAA GTACGTATCG GCCGAGTAGA CCATCAGAAT AATACCGCAG AGGTCTTATC TGGTTTAATG GAAGGCGATG AAATTGTTAT CGACGCTGGA CGTTATTTAA TACAGTCCTC AGCAACAAAA GGTCAGGAGT AA
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Protein sequence | MSRLSNNLFF GTILATTVLA TIVSYTAQAS DVATLKLVYS EQYQPRIYDA KIEAIKAATI SAQTSGRIIN IHFDVNDLVP QGAALLEITN KEQGAGYAGA EADLAKAEAL NSEAQAQYLR YKTLFPKGAI SKGAMDEATA KAKSSKQAVS AAQAQLIKAK ESLNYTVVSA PFSGRMTQRF IEQGETISYG QALFSGYDTQ HLRAVFQIPQ QDVAQVQKQE QVSVQLFNGD KIISNDINVY QFADPLTHQH QVRVNIDASN IEDVIVGQWI KVIVNFPSRT SLMIPLSAIH QVSDLTSVYR QMADKIVLNQ VRIGRVDHQN NTAEVLSGLM EGDEIVIDAG RYLIQSSATK GQE
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