Gene Sfri_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2685 
Symbol 
ID4279591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3226721 
End bp3227428 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content40% 
IMG OID638135490 
Producthypothetical protein 
Protein accessionYP_751364 
Protein GI114563850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0316068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATC TACAGTTCCG TCGCCATGCA TACGGTGACC CCAATAATCA AGCCGACGAT 
TTTTTAGCTC ATTTAGCTGA AAATGAAGAC GATGCTAAAT TTGTCAAAGA TCTACAAGCA 
TTTGACCATA AACTCACTCA AGCACTCAAT ATTAGTGTGC CTGATGGACT TGCTGATAAG 
TTAATTTTAC GACAGCAATT GAGTCAGCAT CAAAAGAGTA AAAAACAGAC CCGTTACTTA 
ATGGCCATGG CCGCTTCAGT TGCCTTTATT GTGGGAGTTA GCTTTAGTCT ATTACGTTTC 
ACGCCAGTAA ACTTAGGTGA AAACTCGTTG GCTCATGTTC ACCATGAAAC CAAAGCATTA 
GTGATGGAAC AGGATATTGG TTTTAACGAC GTAAACTTTA AACTCGCCAG TTTAGAAGGA 
TTAAGTGATT CGAAATTTAT CCAACAACCA GGCCGTGTTT TTTACACTTC TTATTGCGAC 
TTCCAAGGTG TTAAATCATT GCATTTAGTG ATGGCCGACG AGAACGGAAA CAAAGTCACG 
TTATTTATTG TGCCAGTCGA AAGTCGTATT GTGTTAGAAG AAGCTTTTGC TGATAACCAA 
TATAAAGGCC AAAGTTTTCA AACAGCCGAC GCCTATATGG TGTTAGTGGG CGAACCCGCT 
TCTGACCTTG AATTTGTCAA AAAAGAAGTT GAAAACACCT TTATCTAA
 
Protein sequence
MDDLQFRRHA YGDPNNQADD FLAHLAENED DAKFVKDLQA FDHKLTQALN ISVPDGLADK 
LILRQQLSQH QKSKKQTRYL MAMAASVAFI VGVSFSLLRF TPVNLGENSL AHVHHETKAL 
VMEQDIGFND VNFKLASLEG LSDSKFIQQP GRVFYTSYCD FQGVKSLHLV MADENGNKVT 
LFIVPVESRI VLEEAFADNQ YKGQSFQTAD AYMVLVGEPA SDLEFVKKEV ENTFI