Gene Sfri_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2683 
Symbol 
ID4279589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3224429 
End bp3226063 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content43% 
IMG OID638135488 
Producthypothetical protein 
Protein accessionYP_751362 
Protein GI114563848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.382096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAATCA GAACTTTTTT TAGCCTATTG CTATTCATCA TTGCAGCACC GGTATTTGCA 
CTTAGCCAAG TACAAGCTAC CATCGACCGA AACCCAATTG TTACAGGCGA ATATTTCGTA
CTCGATATTA TTGCCGATGA TGATCTAAAT GCGGGTGCAT TAGATACCTC TGTATTACTC
GATGACTTTA TTGTTGGAAG AACCAGTGTT GGCCGTAGCA CTAAAATGGT TAATTTTGAC
ACCACCAAAG AAACTCGTTG GCAGGTATTA TTGTCACCTA AGTCAGCAGG CAACGTCACC
ATACCAGCGT TTAACATCAA AGGGATTAGC TCAAACCCAA TTACCTTAAA AGTTATTCCA
CAAGGTTCAC CTGCCGACGA AGTACAAAAC GTATTTATTA AAATCAACAA TAATGCCTCT
GAAGCTTATG TCGGCCAATT AATCACTTAT AAAGTGAAGC TATACCTTGC AGTAGAATTA
CAACGTGGAG TGTTAAGTGC ACCCGTTATT GAAGGGGCGC AAATCAAGCA AATCGGCGAA
GACAAAGATG GCAGTGAGAT CATTGATGGC CGTCGCTTTA GAGTGATTGA ACGCACTTAC
GGTATTATTG CCGATCTGCC AGGGGAGTTA GTTATCAATG GCGCCAGTTT CTCAGGCGAT
GTACTTGTTG AAGCGCCTAG ACGCGGGGGT ATGTTTGGCT TTAATGAAAG TCGGCCAATG
CAAACAGAAG CTGAAAGAGA AGTGATCCAA ATTAATCCAA CACCGCCAAG CTACCAAGGA
AAATGGTTAG TCAGCGATAT TGCAGTATTA AAAGAGACGT GGCCAGACGA TATCAGCGAA
TTTGAAGTTG GCAGCCCAAT TACCCGCACA ATTAGTCTGA TTGCATCAAA TACCGATGAC
ACTAGTTTAC CCGACATCGA TATTCCACTG GCCGACGGCT TAAAAGCCTA TCCAGAAAAA
CCGTTAAGAC AAACTTTTGT CCGCGATAAT CAAGTGGTAT CACAATACAG TATCACTACT
GCTATTGTGC CAACAAAACC AGGCACTTAC ACTCTACCAG AGATAAATGT ACCTTGGTGG
AACCCACATC TTAAAAAGCA ACAATTTGCC ACATTACCCG CCCGCACGAT TAACGTGGTA
GGCAGCACAA CGGCTACGAC AGATATTCCA CCTGCAGATA CTTTTAGTGC CGTTCAAGAC
AGCGGATATT GGCCGTTACT GAGTGCGGTT CTGGCGGTAT TATGGCTCAT CACTTTAGTC
TTATGGCGTA AAGCAGCATC GATAAACCGC ACGTTGCCGC AATCTAATCA AGACAATAAA
AACCTCAAAA CACCTAGAAA AACAGCAACT ACCGGACTCA ATGCAATTAT TCATGCATGC
GATCGTAACG ACAGCAGTGC TGCTATTATT GCGGTACAAG CCTACTTTAG CGAGCGTTTA
GGCAAATTGA TGACCTTGAC TCAAATTAGC GGTTTATCAG AACAATTGGC GTTTGCAATG
AATAAGCTAC AAGCAGACAA ATACAGCAAT AAGCCACAAG CGATTGATAA AAAATCGCTA
ATGGATGCTA TTTTGGCTTA TCAACAACCC CCTCTCGACA ATAAAAAATC AATAATCGCG
GAGCTAAATC CATAG
 
Protein sequence
MVIRTFFSLL LFIIAAPVFA LSQVQATIDR NPIVTGEYFV LDIIADDDLN AGALDTSVLL 
DDFIVGRTSV GRSTKMVNFD TTKETRWQVL LSPKSAGNVT IPAFNIKGIS SNPITLKVIP
QGSPADEVQN VFIKINNNAS EAYVGQLITY KVKLYLAVEL QRGVLSAPVI EGAQIKQIGE
DKDGSEIIDG RRFRVIERTY GIIADLPGEL VINGASFSGD VLVEAPRRGG MFGFNESRPM
QTEAEREVIQ INPTPPSYQG KWLVSDIAVL KETWPDDISE FEVGSPITRT ISLIASNTDD
TSLPDIDIPL ADGLKAYPEK PLRQTFVRDN QVVSQYSITT AIVPTKPGTY TLPEINVPWW
NPHLKKQQFA TLPARTINVV GSTTATTDIP PADTFSAVQD SGYWPLLSAV LAVLWLITLV
LWRKAASINR TLPQSNQDNK NLKTPRKTAT TGLNAIIHAC DRNDSSAAII AVQAYFSERL
GKLMTLTQIS GLSEQLAFAM NKLQADKYSN KPQAIDKKSL MDAILAYQQP PLDNKKSIIA
ELNP