Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2683 |
Symbol | |
ID | 4279589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3224429 |
End bp | 3226063 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135488 |
Product | hypothetical protein |
Protein accession | YP_751362 |
Protein GI | 114563848 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.382096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAATCA GAACTTTTTT TAGCCTATTG CTATTCATCA TTGCAGCACC GGTATTTGCA CTTAGCCAAG TACAAGCTAC CATCGACCGA AACCCAATTG TTACAGGCGA ATATTTCGTA CTCGATATTA TTGCCGATGA TGATCTAAAT GCGGGTGCAT TAGATACCTC TGTATTACTC GATGACTTTA TTGTTGGAAG AACCAGTGTT GGCCGTAGCA CTAAAATGGT TAATTTTGAC ACCACCAAAG AAACTCGTTG GCAGGTATTA TTGTCACCTA AGTCAGCAGG CAACGTCACC ATACCAGCGT TTAACATCAA AGGGATTAGC TCAAACCCAA TTACCTTAAA AGTTATTCCA CAAGGTTCAC CTGCCGACGA AGTACAAAAC GTATTTATTA AAATCAACAA TAATGCCTCT GAAGCTTATG TCGGCCAATT AATCACTTAT AAAGTGAAGC TATACCTTGC AGTAGAATTA CAACGTGGAG TGTTAAGTGC ACCCGTTATT GAAGGGGCGC AAATCAAGCA AATCGGCGAA GACAAAGATG GCAGTGAGAT CATTGATGGC CGTCGCTTTA GAGTGATTGA ACGCACTTAC GGTATTATTG CCGATCTGCC AGGGGAGTTA GTTATCAATG GCGCCAGTTT CTCAGGCGAT GTACTTGTTG AAGCGCCTAG ACGCGGGGGT ATGTTTGGCT TTAATGAAAG TCGGCCAATG CAAACAGAAG CTGAAAGAGA AGTGATCCAA ATTAATCCAA CACCGCCAAG CTACCAAGGA AAATGGTTAG TCAGCGATAT TGCAGTATTA AAAGAGACGT GGCCAGACGA TATCAGCGAA TTTGAAGTTG GCAGCCCAAT TACCCGCACA ATTAGTCTGA TTGCATCAAA TACCGATGAC ACTAGTTTAC CCGACATCGA TATTCCACTG GCCGACGGCT TAAAAGCCTA TCCAGAAAAA CCGTTAAGAC AAACTTTTGT CCGCGATAAT CAAGTGGTAT CACAATACAG TATCACTACT GCTATTGTGC CAACAAAACC AGGCACTTAC ACTCTACCAG AGATAAATGT ACCTTGGTGG AACCCACATC TTAAAAAGCA ACAATTTGCC ACATTACCCG CCCGCACGAT TAACGTGGTA GGCAGCACAA CGGCTACGAC AGATATTCCA CCTGCAGATA CTTTTAGTGC CGTTCAAGAC AGCGGATATT GGCCGTTACT GAGTGCGGTT CTGGCGGTAT TATGGCTCAT CACTTTAGTC TTATGGCGTA AAGCAGCATC GATAAACCGC ACGTTGCCGC AATCTAATCA AGACAATAAA AACCTCAAAA CACCTAGAAA AACAGCAACT ACCGGACTCA ATGCAATTAT TCATGCATGC GATCGTAACG ACAGCAGTGC TGCTATTATT GCGGTACAAG CCTACTTTAG CGAGCGTTTA GGCAAATTGA TGACCTTGAC TCAAATTAGC GGTTTATCAG AACAATTGGC GTTTGCAATG AATAAGCTAC AAGCAGACAA ATACAGCAAT AAGCCACAAG CGATTGATAA AAAATCGCTA ATGGATGCTA TTTTGGCTTA TCAACAACCC CCTCTCGACA ATAAAAAATC AATAATCGCG GAGCTAAATC CATAG
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Protein sequence | MVIRTFFSLL LFIIAAPVFA LSQVQATIDR NPIVTGEYFV LDIIADDDLN AGALDTSVLL DDFIVGRTSV GRSTKMVNFD TTKETRWQVL LSPKSAGNVT IPAFNIKGIS SNPITLKVIP QGSPADEVQN VFIKINNNAS EAYVGQLITY KVKLYLAVEL QRGVLSAPVI EGAQIKQIGE DKDGSEIIDG RRFRVIERTY GIIADLPGEL VINGASFSGD VLVEAPRRGG MFGFNESRPM QTEAEREVIQ INPTPPSYQG KWLVSDIAVL KETWPDDISE FEVGSPITRT ISLIASNTDD TSLPDIDIPL ADGLKAYPEK PLRQTFVRDN QVVSQYSITT AIVPTKPGTY TLPEINVPWW NPHLKKQQFA TLPARTINVV GSTTATTDIP PADTFSAVQD SGYWPLLSAV LAVLWLITLV LWRKAASINR TLPQSNQDNK NLKTPRKTAT TGLNAIIHAC DRNDSSAAII AVQAYFSERL GKLMTLTQIS GLSEQLAFAM NKLQADKYSN KPQAIDKKSL MDAILAYQQP PLDNKKSIIA ELNP
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