| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2677 |
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| Symbol | fadI |
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| ID | 4279583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3217290 |
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| End bp | 3218600 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135482 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_751356 |
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| Protein GI | 114563842 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA GACAACAAGT AACAAATTCC CGGGGTGAGC GCATTGCGAT TGTTGCCGGT
TTAAGAACAC CATTTGCAAA ACAAGCAACA GCCTTTCATG GCGTATCCGC GCTAGATATG
GGCAAAATGG TGGTTAATGA GTTGCTGTCT CGCTCTGAAA TCGACCCTCA GTTAATTGAA
CAACTTGTTT ACGGCCAAGT TGTACAAATG CCTGCGGCAC CCAATATTGC CCGTGAAATT
GTACTTGGCA CTGGAATGAA TGTATCAACA GATGCTTATT CTGTTACCCG CGCCTGTGCA
ACCAGTTTTC AGTCGGCGGT TAACGTAGCT GAATCAATTA TGACCGGCAA TATTGAAATC
GGCCTAGCGG GTGGTTCAGA TTCGTCTTCA GTATTACCTA TTGGGGTATC CAAAAAGCTT
GCACATGCTT TAGTCGATTT AAATAAAGCA CGTACTTTTA AGCAGAAATT TGCGATTGCA
CGTCGTTTAG GCTTGAAAGA CTTAATGCCA GTACCGCCTG CGGTTGCTGA GTATTCAACC
GGTTTGTCTA TGGGGCAAAC CGCCGAACAA ATGGCTAAGA CATACAATAT TAGCCGTGCA
GATCAAGATG CGTTAGCACA CCGTTCGCAT ACATTGGCGA CCGAAACATG GAACTCAGGT
CATCTTCGCA ATGAAGTCAT GACAGCTCAT ATTCCGCCAT ATAAACAATT CATTGACCGT
GACAACAATA TCCGTGAAAA CTCTGTATTA GAGTCTTACG CCAAGTTACG TCCCGCATTT
GATCGCAAGC ACGGTACCGT TACTGCCGCC AACAGTACGC CATTAACTGA TGGTGCTTCA
GCCATTATTT TAATGAGTGA AGGTCGCGCT AAAGCTCTAG GTTATCAACC TATTGGTTAC
ATCAAGAGTT ATGCGTTTAC GGCTATCGAT GTATGGCAAG ACATGTTAAT GGGGCCTTCG
TATGCTACGC CATTAGCATT GAAACGTGCT GGAATGGAAT TAGAAGATTT AACGCTGATT
GAAATGCACG AAGCATTTGC TGCACAAACA TTGGCAAATA TGCAGATGTT TGGTTCTAAA
AAGTTTGCTG AAGAAAAATT AGGTCGTAAC CGCGCAATTG GCGAAATCGA CATGAGTAAG
TTTAACGTAC TGGGTGGCTC TTTGGCTTAT GGTCATCCTT TTGCAGCAAC CGGTACGCGT
TTGATTACCC AAGTGTGTAA TGAACTTAAG CGTCGTGGTG GTGGTACTGG TTTAGCAACT
GCTTGTGCTG CAGGTGGTTT AGGTGCAGCA ATGATTTTGG AGGTGGAGTA A
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| Protein sequence | MSDRQQVTNS RGERIAIVAG LRTPFAKQAT AFHGVSALDM GKMVVNELLS RSEIDPQLIE
QLVYGQVVQM PAAPNIAREI VLGTGMNVST DAYSVTRACA TSFQSAVNVA ESIMTGNIEI
GLAGGSDSSS VLPIGVSKKL AHALVDLNKA RTFKQKFAIA RRLGLKDLMP VPPAVAEYST
GLSMGQTAEQ MAKTYNISRA DQDALAHRSH TLATETWNSG HLRNEVMTAH IPPYKQFIDR
DNNIRENSVL ESYAKLRPAF DRKHGTVTAA NSTPLTDGAS AIILMSEGRA KALGYQPIGY
IKSYAFTAID VWQDMLMGPS YATPLALKRA GMELEDLTLI EMHEAFAAQT LANMQMFGSK
KFAEEKLGRN RAIGEIDMSK FNVLGGSLAY GHPFAATGTR LITQVCNELK RRGGGTGLAT
ACAAGGLGAA MILEVE
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