| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2676 |
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| Symbol | fadJ |
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| ID | 4279582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3215158 |
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| End bp | 3217290 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135481 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_751355 |
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| Protein GI | 114563841 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGG AAAAAACATT TAATTTAGCT CGTCGTGACG ATGGTATTGC CATTTTAACA
ATGGACGTTC CTGGCGAAAC CATGAACACC TTAAAAGAGC AATTTGGCCC TGAAATCAGT
GAAATATTAA CTGAAATCAA AGCTGACAGC AGTATCAAAG GTCTCGTTGT TATTTCAGGT
AAAGCAGATT CGTTTGTTGC CGGTGCCGAC ATTACCATGT TAGCTGCTTG TAAGAATGAA
GAGCAAGCCA AAACATTGTC ACAACAAGGG CATGTGGTTT TTGCTGAGCT TGAAGGATTA
TCTATTCCAG TTGTTGCCGC GATCAACGGT GCTTGTTTAG GTGGTGGTTT AGAGTTAGCG
CTAGCGTGTC ATTTACGCGT ATGCAGTGAC GATAAAAAAA CCATGCTAGG TGTGCCAGAA
GTGCAACTGG GTTTATTGCC TGGTGGTGGC GGTACTCAAC GTTTGCCTCG TTTAGTGGGT
ATTACAACTG CTCTTGATAT GATGTTAACG GGTAAACAAA TTCGTCCTAA GCAAGCGTTA
AAAATGGGTT TAGTGAATGA TGTTGTGCCT AACTCAATTT TGCTTGAAAC TGCGGTTGAG
CTAGCGAAAA AAGGTAAACA GGCCGCAAAG CCTGTCGTGC AATCTAAAAT TAATCAATTT
TTAGAATCAA CTTCGTTTAC TCGCGATATT ATTTTTGATC AAGCGCGTAA GCAAGTATTA
AAGAAAACCC AAGGTAATTA TCCTGCACCG GCTAAAATCA TCGATTGTGT TCGTCAAGGT
ATGAATAAAG GCATGGTGAA AGGGCTTGAG GTTGAAGCGA CTCATTTTGC TAATTTGGTG
ATGTCGAAAG AGTCGGCAGC ATTACGTAGC TTGTTTTTTG CCACCACAGA AATGAAAAAA
GAAACTGGTG CTGAAGGCGC TGTGCCACGT AAAGTTAAAA AAGTAATGGT ATTAGGCGGT
GGCTTAATGG GCGGTGGTAT TGCGTCTGTA ACAACCACTA AAGCTAAAAT TCCAGCGCGT
GTAAAAGACA TTTCAGAGCA GGGATTAAGT AACGCACTAT CATATGCTTA CAAGCTGCTA
GATAAAGGCG TTAAGCGTCG TCATATGACA CCTATAGCGC GTGACAATAT TATGGCATTA
ATGACAACGA CGACAGAATA TACTGGCATT AAAGATGCCG ATATCGTTGT TGAAGCGGTA
TTTGAAGATT TAGCGCTTAA ACATAAAATG GTTCAAGATG TTGAGCGTGA ATGTGGTGAG
AACACCATTT TTGCTTCTAA TACGTCTTCA TTACCTATTG GTCAGATTGC TGCTGCGGCA
AGTCGTCCTG AAAATGTGAT TGGTTTACAT TACTTCTCTC CGGTAGAAAA AATGCCATTA
GTTGAAGTGA TTGCCCATAA AACCACATCA CCAGAAACGA TTGCTACCAC AGTGGCGTTT
GCACGCAAGC AAGGTAAGAC ACCTATTGTG GTTCAAGACG GTGCTGGTTT TTATGTTAAC
CGTATTCTTG CCCTGTATAT GAACGAAGCT GCGCAATTAT TACTAGAAGG TCAGCGTATT
GAGCATCTAG ATCGCGCATT AGTGAAGTTT GGTTTCCCTG TGGGACCGAT GACTTTGCTT
GATGAAGTGG GCATTGACGT CGGTGCTAAA ATTTCGCCGA TTTTAGAAAA AGAACTTGGC
GATCGTTTTA AAGCGCCTGC AGCTTTTGAC AAGTTATTGG CCGATGACCG TAAGGGTCGT
AAAAATGGCA AAGGTTTCTA TCAATACGGA CCTAAAGCTA AAAAAGCCAA ATTGGTTGAT
GAATCCGTTT ACAAGGTTCT CGATATCTTA ATCGCTTCAG ATAAAGAAGC AAAAGGTGTG
GCAGAGCGTT GTACGATTCA GATGCTCAAT GAGGCTGTTC GTTGTCTTGA AGAGGGCATT
ATTGCCTCGG CAAGAGATGG TGACATCGGT GCTATATTCG GTATCGGCTT TCCGCCATTC
TTAGGTGGTC CATTCCGTTA TATCGACACC TTAGGTGCAA GTAATTTAGT CGCGACTTTA
CAAGGTTATC AATCACTGTA CGGAGACCGT TTCGCACCGT GCGATACGTT AGTCAAAATG
GCTAGCGATG GCAGCCAATT TTATAAAAAG TAA
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| Protein sequence | MSMEKTFNLA RRDDGIAILT MDVPGETMNT LKEQFGPEIS EILTEIKADS SIKGLVVISG
KADSFVAGAD ITMLAACKNE EQAKTLSQQG HVVFAELEGL SIPVVAAING ACLGGGLELA
LACHLRVCSD DKKTMLGVPE VQLGLLPGGG GTQRLPRLVG ITTALDMMLT GKQIRPKQAL
KMGLVNDVVP NSILLETAVE LAKKGKQAAK PVVQSKINQF LESTSFTRDI IFDQARKQVL
KKTQGNYPAP AKIIDCVRQG MNKGMVKGLE VEATHFANLV MSKESAALRS LFFATTEMKK
ETGAEGAVPR KVKKVMVLGG GLMGGGIASV TTTKAKIPAR VKDISEQGLS NALSYAYKLL
DKGVKRRHMT PIARDNIMAL MTTTTEYTGI KDADIVVEAV FEDLALKHKM VQDVERECGE
NTIFASNTSS LPIGQIAAAA SRPENVIGLH YFSPVEKMPL VEVIAHKTTS PETIATTVAF
ARKQGKTPIV VQDGAGFYVN RILALYMNEA AQLLLEGQRI EHLDRALVKF GFPVGPMTLL
DEVGIDVGAK ISPILEKELG DRFKAPAAFD KLLADDRKGR KNGKGFYQYG PKAKKAKLVD
ESVYKVLDIL IASDKEAKGV AERCTIQMLN EAVRCLEEGI IASARDGDIG AIFGIGFPPF
LGGPFRYIDT LGASNLVATL QGYQSLYGDR FAPCDTLVKM ASDGSQFYKK
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