| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2668 |
|---|
| Symbol | |
|---|
| ID | 4279575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3203792 |
|---|
| End bp | 3204736 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638135473 |
|---|
| Product | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase |
|---|
| Protein accession | YP_751347 |
|---|
| Protein GI | 114563834 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAGA TCTTTGTAGA TGAAGCTGTC ACTGAGTTAC GTACTATAGC TGATATGTTA
CGTTGGGCTG TCAGCCGTTT TAATGATGCC AATATTTATT ATGGTCACGG AACGGATAAT
GCTTGGGACG AAGCCATTGC ATTGGTTTTT GATGCTCTAC ACTTACCAGA AGATATCGGT
CAGCAGGTTA TTTTAAGTAA TTTAACCAGC AGCGAAAAAC ATAAAATCGT TGAATTGATT
ATTCGCCGTG TACGTGAACG TTTACCAGTA CCGTATTTGA CCAATAAAGC CAAATTTGCA
GGGCTTGAAT TTTATGTAGA TGAACGCGTA CTTGTACCGC GTTCGCCGAT TGCCGAAATG
ATTAATAATC AATTTAGCCC TTGGTTATAC AACAAACCGG TTAATCGCAT TTTGGATTTA
TGTACCGGTA GTGCCTGTAT TGCCATTGCT TGTGCTTATG CGTTTGAAGA TGCCGAAGTT
GATGCATTAG ATATTAGTGA GGACGCACTT GAAGTCGCGC AGATTAATAT TGAGTCTTTG
GGCGTGTTGG ATCGTGTTTT CCCGATGCAA TCCGATTTAT TCTCGGCGAT TCCCAAAGGC
CAGCATTACG ACTTAATTGT GTCTAACCCT CCATATGTAG ATGCACAAGA TATTGGTGAT
ATGCCTGATG AGTATCATCA CGAACCTGCT ATTGGGTTAG CATCTGGCAA TGATGGCTTA
GACTTAACCA AGCGTATCTT AGCCAATGCA GCTGATTATT TAACAGAAAC GGGTTTACTG
GTTGTTGAAG TTGGTAATTC AATGGTTCAT TTGATTGAGC AATATCCTGA TATGCCGTTT
ACTTGGGTTG ATTTTGAATT TGGCGGTGAT GGCGTGTTTG TATTAACCCG TGATCAGCTA
GTTGAAAATG AATCACTTTT CGCCATCTAT AAAGATAGTG AATAA
|
|---|
| Protein sequence | MDKIFVDEAV TELRTIADML RWAVSRFNDA NIYYGHGTDN AWDEAIALVF DALHLPEDIG
QQVILSNLTS SEKHKIVELI IRRVRERLPV PYLTNKAKFA GLEFYVDERV LVPRSPIAEM
INNQFSPWLY NKPVNRILDL CTGSACIAIA CAYAFEDAEV DALDISEDAL EVAQINIESL
GVLDRVFPMQ SDLFSAIPKG QHYDLIVSNP PYVDAQDIGD MPDEYHHEPA IGLASGNDGL
DLTKRILANA ADYLTETGLL VVEVGNSMVH LIEQYPDMPF TWVDFEFGGD GVFVLTRDQL
VENESLFAIY KDSE
|
|---|
| |