Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2659 |
Symbol | |
ID | 4279566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3192844 |
End bp | 3194760 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135459 |
Product | ABC transporter ATPase component |
Protein accession | YP_751338 |
Protein GI | 114563825 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTCTGG TACGGATTAA TAATGGCTCG TTAGCCTACG GTTACATTCC TTTGCTGTTA AATGCAGACT TTACCATTGA ACCTGGTGAG CGCGTATGTA TCGTCGGGCG TAATGGCGCC GGTAAATCAA GTTTAATGAA AGTATTATCA GGTGATGTAT TACTTGATGA TGGTGAGTTT AATATTGCAA ATGACGTTAA CGTTAGCCGT TTACAGCAAG ACCCTCCTAA AGCAGAAACT GGATCGGTTT ACTCTTATAT CGCGGCGGGT TTGAAAGAAA TTGGTGAAGC GTTAGAACAG TATCATCAAT TATCTCATGA TGTTGCAGAT GCAAATCCTG AGCAAATGGA TCGTATGCTG AATCAAATGC AGCGTCTTCA AGAAGTATTA GATCACAATG ACGGCTGGCA ATTAGATTCA CGCATTATCC AAAACTGTCA ATTGTTAGGC CTTGATCCTG ATAAGCCATT AAATGAATTG TCTGGTGGTT GGCAGCGTAA AGTGGCGTTA GCTCGTGCAC TTGTTGTTAA TCCTGATTTA TTGTTACTTG ACGAACCTAC AAACCATTTA GATATCGATA CTATTGAGTG GTTAGAGCAA TTTTTATTAA GCTTTAAAGG CGCCATAGTA TTTGTCAGCC ATGACCGTGG TTTTATTCAA AGAATGGCAA CGCGTATCGT CGATTTAGAT CGTGGTGTCG TGATCTCATT TCCAGGTAAC TACCAAGCTT ATTTAGATGG TAAGCAAGAA TGGTTACGAG TTGAAGCTGA GAAAAACGCT CATTTTGATA AGAAACTTGC CGACGAAGAA ACCTGGATCC GTCAAGGTGT TAAAGCACGT CGTACTCGAA ATGAAGGACG TGTTCGAGCG TTGAAAGCAC TACGTACCGA ACGTAGTGAA CGCTTAAACC GTCAAGGTAA CGCCAAAATG TCGGTATCTG ATAACGAACG TTCTGGTAAG TTAGTATTTG ATATTAAAAA TGTTAATTAT AATTTACCTG ATAAAAACTT AGTTAAAGAT TTCAGTACTA CTGTTATACG TGGTGACCGC ATAGCGTTAA TTGGCCCAAA TGGTTGCGGT AAATCAACGC TAATCAAATT GTTAATTGAA AAACTACAGC CTCAATCTGG CGAAATTAAA GTCGGTACTA AGCTAGACGT TGCCTATTTT GACCAGTATC GTGAAGCGCT TGATCCAGAA AAAACAGTAG AAGAAAACGT TGGTGAGGGT AAAAGTACCG TCACCATTAA TGGCCAAGAT CGCCATATTC TAAGCTATCT ACAAGATTTC TTATTCTCGC CAATGCGTGC TCGTACTCCG GTAAAAGCAC TTTCTGGTGG TGAAAAGAAC CGTTTGTTAT TGGCGAGATT ATTATTACGC CCTGCCAATT TAATTATTCT CGATGAACCA ACAAACGATC TTGATATTGA GACGTTAGAG TTGTTAGAGT CACTACTTGC TGATTTTGCT GGTACATTAC TTATCGTGAG CCACGATAGA GCATTTATCG ACAATACCGT TACTAGCAGT TGGTGGTTTG CGGGCAATGG ACAATGGGCT GAGTATGTTG GTGGTTACCA AGATGCTGTT GCTCAAGGTG CAAAGTTTTA TTCTGAGGAA CCTGTTGCAA CTAATGTTGT CCAACCTACC GCAGTGGTTG AAACAAAGCC TGTCAGTATC CCTGAAAAAG CAGTCAAAAA ACTGTCTTAT AAATTGCAAA AAGAATTAGA TACGCTTCCG AGCCAAATGG AACAGCTCGA GCAAGATATT GCCCAATTGC AGCAAACCAT AGCGGGTGCT GATTTTTATA ATCAACCGCA GGATTTGGTC AATAAAGCAC TGCAGTTGTT GGCAGAAAAA GAACAGAATT TAGAAGTTTG CTTCGAGCGA TGGGAAGAGC TTGAGTCACT GAAGTAA
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Protein sequence | MSLVRINNGS LAYGYIPLLL NADFTIEPGE RVCIVGRNGA GKSSLMKVLS GDVLLDDGEF NIANDVNVSR LQQDPPKAET GSVYSYIAAG LKEIGEALEQ YHQLSHDVAD ANPEQMDRML NQMQRLQEVL DHNDGWQLDS RIIQNCQLLG LDPDKPLNEL SGGWQRKVAL ARALVVNPDL LLLDEPTNHL DIDTIEWLEQ FLLSFKGAIV FVSHDRGFIQ RMATRIVDLD RGVVISFPGN YQAYLDGKQE WLRVEAEKNA HFDKKLADEE TWIRQGVKAR RTRNEGRVRA LKALRTERSE RLNRQGNAKM SVSDNERSGK LVFDIKNVNY NLPDKNLVKD FSTTVIRGDR IALIGPNGCG KSTLIKLLIE KLQPQSGEIK VGTKLDVAYF DQYREALDPE KTVEENVGEG KSTVTINGQD RHILSYLQDF LFSPMRARTP VKALSGGEKN RLLLARLLLR PANLIILDEP TNDLDIETLE LLESLLADFA GTLLIVSHDR AFIDNTVTSS WWFAGNGQWA EYVGGYQDAV AQGAKFYSEE PVATNVVQPT AVVETKPVSI PEKAVKKLSY KLQKELDTLP SQMEQLEQDI AQLQQTIAGA DFYNQPQDLV NKALQLLAEK EQNLEVCFER WEELESLK
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