| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2650 |
|---|
| Symbol | |
|---|
| ID | 4279557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3178173 |
|---|
| End bp | 3178592 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638135449 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_751329 |
|---|
| Protein GI | 114563816 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTAC AACGAGAGAT GACACTTAAT CCGAAGCAGC GTGGATTTCA TTTAATTACT
GATGAAGTGA TAGCGCGGCT GCCAGAGCTA AGAGGTATCA ATGTTGGCTT ATTGCATGTA
TTTATTCAGC ATACTTCTGC ATCGCTTGCG ATAAACGAAA ATGCTGATCC TACGGTCCGT
GGTGATTTGG AGCGACATTT TAATGTACTT GCACCAGAAG GTGCACCATA CTTTCAGCAT
ACTTATGAAG GCGCGGATGA TATGCCTGCT CATATCAAGT CGACCTTGAT TGGTTCTAGC
CAGTCTATTC CGATTACCAA TGGACGTTTG AACTTGGGTA TTTGGCAAGG TTTATATTTA
TGTGAACATC GCGACCATAC TTCGGCGCGT ACTATTATTA TCACCTTGCA AGGTGAATGA
|
|---|
| Protein sequence | MWLQREMTLN PKQRGFHLIT DEVIARLPEL RGINVGLLHV FIQHTSASLA INENADPTVR
GDLERHFNVL APEGAPYFQH TYEGADDMPA HIKSTLIGSS QSIPITNGRL NLGIWQGLYL
CEHRDHTSAR TIIITLQGE
|
|---|
| |