Gene Sfri_2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2649 
Symbol 
ID4279556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3177278 
End bp3177922 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content42% 
IMG OID638135448 
Productresponse regulator 
Protein accessionYP_751328 
Protein GI114563815 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATCTG TATATTTGGT TGACGACCAT GAACTCGTGA GAACGGGTAT TCGTCGCATT 
TTGGAAGATG AACGCGGTAT TAAAGTCATC GGTGAAGCAC CTGATGGAGA AACAGCCGTA 
CAGTGGTCTC GACAGAATGA AGCTGATGTC ATTTTAATGG ACATGAATAT GCCTGGTATG 
GGGGGATTAG AAGCCACCCG TAAGATTTTA CGCTATCAGC CAGACGCTAA AATTATTGTG 
TTAACCGTAC AAACAGAAGA CCCTTTTCCG ACCAAAGTGA TGCAGGCTGG TGCTTCTGGT 
TACTTAACTA AAGGTTCCAC ATCACCAGAA GTATTACGAG CCATTACTCA AGTGGCTCGT 
GGTCAACGTT ATTTGTCGCC AGAAATTGCG CAACAAATGG CGCTAAGCCA ATTTAACCAC 
TCTGACGAGA ATCCATTTAG CAGTTTGTCT GAACGTGAAT TGCAAATCAT GATGATGATA 
ACCAATGGTG AAAAGGTTAA TGATATTTCT GAAAAATTAA ATTTAAGCCC TAAAACCGTC 
AACAGTTATC GTTATCGACT ATTTGCGAAA CTGGGGATCG GCGGTGACGT TGAGTTGACC 
CGTTTAGCTA TCCGTTACAA AATGCTCGAT ACAGGTTCAT TCTAG
 
Protein sequence
MISVYLVDDH ELVRTGIRRI LEDERGIKVI GEAPDGETAV QWSRQNEADV ILMDMNMPGM 
GGLEATRKIL RYQPDAKIIV LTVQTEDPFP TKVMQAGASG YLTKGSTSPE VLRAITQVAR 
GQRYLSPEIA QQMALSQFNH SDENPFSSLS ERELQIMMMI TNGEKVNDIS EKLNLSPKTV 
NSYRYRLFAK LGIGGDVELT RLAIRYKMLD TGSF