Gene Sfri_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2647 
Symbol 
ID4279554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3174808 
End bp3175356 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content42% 
IMG OID638135446 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_751326 
Protein GI114563813 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00795456 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTTA ACTTACCTAT TGCACTGACA TTATTCCGTA TTGCTTTGTT ACCCGTATTT 
ATAGCGGTAT TCTATTTACC ATATCCATGG GCACCATTTG TTTCGGCATT TATTTTCTGG 
TTGGCCGCTT TGACTGATTG GTTAGACGGT TATGCTGCCC GTAAACTTGG TCAACTAACC 
CGATTTGGCG CTTTTTTAGA TCCAGTAGCA GATAAAGTCA TGGTGTCGAC AGCATTAGTG 
CTGTTGGTTC AACAAAATGA CAATGTGTAC TTAACCTTAG CGGCGTTATT TATGATTGGT 
CGCGAAATTG TTATTTCAGC CCTGCGTGAA TGGATGGCCG AAATAGGCAA ACGTGGCGTA 
GTTGCCGTGT CTTGGATTGG TAAATATAAA ACTGCCACGC AAATGATCGC CATTATTGGA 
TTGATTTGGA AACCTACACC TTGGCTAACA GATGTCGCTT ATGGCTTGTT TTATATTGCC 
GCAGCACTGA CGTTCTGGTC GATGATGAGT TACATTTCAG CAGCTTGGAA AGATTTAACG 
GCAGAATAG
 
Protein sequence
MPFNLPIALT LFRIALLPVF IAVFYLPYPW APFVSAFIFW LAALTDWLDG YAARKLGQLT 
RFGAFLDPVA DKVMVSTALV LLVQQNDNVY LTLAALFMIG REIVISALRE WMAEIGKRGV 
VAVSWIGKYK TATQMIAIIG LIWKPTPWLT DVAYGLFYIA AALTFWSMMS YISAAWKDLT 
AE