Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2637 |
Symbol | |
ID | 4279544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3157872 |
End bp | 3159833 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135433 |
Product | decaheme cytochrome c |
Protein accession | YP_751316 |
Protein GI | 114563803 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATA AAAAATACAC AAAAATGGCA TTGTTACTTG CTATGTCAGC ATCAATGACA CTGGTTGGTT GTGGCGGAGG CGATGATGGT GAAGCTGGTA ATCCAGGTAA TCCTGGTGGC GAGCCTGCTG AAGCGATTAA GACACTAAAC TTAGATATCA CTAAAGTCAC TTATCAAGAC AGCAAACCGA CTATTGAAGT ATTTGCGACC AATGAAAAAG ATCTCCCTGT AGCAGGTCTT AAAGACTTTG AAATTAAAAA AGTCGTCCAA CTCATTCCAG CTGGCGCAAG CGGTGCAGGT AATTCAGCCC AATGGCAATT TATTGGCTCC GAAAAAGCTT TTACCGACCA TGGTAACGGC AATTACAGTT TCACAGTCAA TGTTGAAGGG TTTAATCCTG AGCTAACCCA ACGTTATAAT GTAATTGCAA GTGCATCAAC CTTGCAAGAC GGCGTTACCG GAGTGCCGCG TACTGAAATT ACCGAAGATT TTGACGGTGA AGGATTCGAG GCTAAATACA CTAAAAACAT CGTTAACACC GCCACTTGTA ATACCTGTCA TGCAGAAGGT GAAAGCATTT ATCATAGCTA CACTGATTTA GAAACCTGTA CATCATGTCA TACCAATGAA TTGGCTATTG AAAAAGGCAA GGTTCAAGAT GAGTTCAGTC ACTTAATTCA TAATGTTCAT AACAATGCCA AAATGTATGG ACGCAACTTA GACAAGAGTG CAGAAACAGC GCATGCGATA GTGCAAGATA ATTGCACCAC TTGTCATGTT AATTCAGAAC AACTGAGTGA ATCGAACAAC TGGTCTCGTA TTCCAACCAT GGAAGCCTGT TCAAGTTGTC ATACCGACAT TGACTTTAAA ACGGGTCAAG GTCATCCGCA ACAAGTCGAT AATTCAAATT GTATAGCTTG TCATAATGCA AGTTGGACAG AAGAGTTGCA CACAACATCG TATACTCAGA AAAAAACATT TATCGATTTA TACGGAATGA CAGCAACATT AACGGCTAAT AAATCAAGCG CTGAAGACAA ATCAGCGACC CTATCGGTAA CAATTTTAGA TGCTAATGGT ACGGCCATTG ACGCAACAAG CTTAATCAGC AAAATTCAAC GCGTTGAAAC CATTACGAAC GTCGGACCTA ACTTCCCAAT TATGGGATAT AACCCTAGCC CAGGCAGCGG TTTAGCAAAA ATCAGTAAAG ACTTTATCAA AGCGGGTCTG TTACAAGCAG ATGTAATCAT TGAATCAGGT AACTTGGTCT ATAACATTGC ATCTCTGCCA TTTGGTGCTG GCGATACAGA TACTGCCTTT AGCTTTATTG GTCTTGAAAT GTGTAACGAT GGTATTCAAG CCATTGATTG TGTCGATGGC GTAGCAACTA CCAGTATGAA AGCCGAATTC ACAGTAGGTA CTTTCTCTGG TAATGCGCCT AGCTATCGTC ACACTGACTC GGTCAATTTT GGTTCATGTG ATAATTGCCA TGGCGACACC TTCGAGTTAC ATAAAGGACA CCATGCTGGT TTTGTGATGT CAGAACAATT AGCTCGTGAA CTTAATGGTG AAGTTACCAT AGGTTTAGAT GGTTGTGTGG CTTGTCATAC GCCAGATGGC ACTTATGCTT CTGGTGCTAA TCAAGGTGCC ATTGAAATGA AATTGCACAG TGTTCATGGT GAACAAGGCA TTATCAAAGA CTGTACTCAG TGTCACAGCG ACTTTAATCT TGATGCATTC AAAGTTAAAG GTGCACTTGC TACGTCGCAA GGCCTTTATA CAACACCTAT CACTGCAACG TGCGCATCTT GTCATGGATT TGACACGATT TCGCAGCATG CACAAAGTCA AGGTGCGGTT GTTAATGGTA GCTATCAAGA AGCCAATGAT GCTGCGCAGT TAGAAACCTG TTTCTTCTGC CATGCACCTA CCATTGAAAA CCACACACAA GTGAAGCTTT AA
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Protein sequence | MMNKKYTKMA LLLAMSASMT LVGCGGGDDG EAGNPGNPGG EPAEAIKTLN LDITKVTYQD SKPTIEVFAT NEKDLPVAGL KDFEIKKVVQ LIPAGASGAG NSAQWQFIGS EKAFTDHGNG NYSFTVNVEG FNPELTQRYN VIASASTLQD GVTGVPRTEI TEDFDGEGFE AKYTKNIVNT ATCNTCHAEG ESIYHSYTDL ETCTSCHTNE LAIEKGKVQD EFSHLIHNVH NNAKMYGRNL DKSAETAHAI VQDNCTTCHV NSEQLSESNN WSRIPTMEAC SSCHTDIDFK TGQGHPQQVD NSNCIACHNA SWTEELHTTS YTQKKTFIDL YGMTATLTAN KSSAEDKSAT LSVTILDANG TAIDATSLIS KIQRVETITN VGPNFPIMGY NPSPGSGLAK ISKDFIKAGL LQADVIIESG NLVYNIASLP FGAGDTDTAF SFIGLEMCND GIQAIDCVDG VATTSMKAEF TVGTFSGNAP SYRHTDSVNF GSCDNCHGDT FELHKGHHAG FVMSEQLARE LNGEVTIGLD GCVACHTPDG TYASGANQGA IEMKLHSVHG EQGIIKDCTQ CHSDFNLDAF KVKGALATSQ GLYTTPITAT CASCHGFDTI SQHAQSQGAV VNGSYQEAND AAQLETCFFC HAPTIENHTQ VKL
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