Gene Sfri_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2606 
Symbol 
ID4279513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3118894 
End bp3120039 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content34% 
IMG OID638135402 
Producthypothetical protein 
Protein accessionYP_751285 
Protein GI114563772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA AGACGATAAG AACTCTTGCT CACTTTATAA CAGCATGTTC AGAGATAAAA 
GTTAAAGATG ACCACACATT ATTTTATCGT GGTCATGCTT CCGATATCTA TACTCCATTT
CCTACAATAT TTCGAAATCA AAATGATGAT CCGAAGAAAA GTCGCTATAT TGAAAGTGAA
GGTGAGCTTT TCCATAATTT AGTTACTCAA TGCCCTGAAG AGTTTAAGGA TTGCACATCC
ACTTTTGATT TTTTAGTTAA AATGCAGCAC TACGGTTTAC CTACTCGACT GCTAGATATT
ACAAGTAACC CTTTAGTTGC CCTTTATTTT GCTTGTTGTA CCTTAATTCC AGAATCCACT
AAAGATAAGA ATGCCAAGAA TGGTCAGGTA CTAGTTTATC AAGTGCCTAA TGAAGAAATT
AAATATTACA ACAGCGACAC TGTCTCAGTA ATAAGTAATT TAGCTCGGGT TAATACTAGC
TTTAATTTTA CTGACGAGGA AGACAGAGAG CGCTTCTTAC ATTCAATTCA AGCTGAAAAG
CCTTACTTTA AACCCTATAT TAAAGAAGCA CATCTTCATT CTGTTATCTG CGTAAAACCT
AAGTTAGACA ACCGTAGAAT TGTAAAGCAA AGTGGGGCTT TCTTTTTATT TGGTATGGGT
AAAAATAAAA CTGATTCAAT TCGTATATCT GACAAGTATC GTCCTGACAT TAAGCATATT
GATATCCCCA AAAGCTCAAA AGAAACCCTA CTTAGGGAGC TGGCAACACT TTCAATTTCA
GAGGCAACAT TATTTCCAGA AATTGATAAT GTTGCTCGTT TTTTGAAAAA AGAAGTCAAG
ATAAAATCTC TCGTTGTTGA AGAGATTGAA GAAGAAAAGT TAGGGAATGA AATATCAGTC
GCTTATCAAG AATTTATTCT AAATAGCCTT GTTCTTAATA CTGACCTGTT AGAACAAATA
CAACATAACT CAGCAGACCG TGCCATGTTG GGATTATATC CCGAGTTATT ACAAAAGGCG
ATAATTGAAA GCCAAGAGAA TTACAATGAA ATTGCATTAA AGCTATTGGT AGAAGAAGAC
AGTGCAGATA AATTTGCGAA AAATATTTTC AGTAAATTGA AACATAAGCT TGAAGAGTTA
TCATAA
 
Protein sequence
MAVKTIRTLA HFITACSEIK VKDDHTLFYR GHASDIYTPF PTIFRNQNDD PKKSRYIESE 
GELFHNLVTQ CPEEFKDCTS TFDFLVKMQH YGLPTRLLDI TSNPLVALYF ACCTLIPEST
KDKNAKNGQV LVYQVPNEEI KYYNSDTVSV ISNLARVNTS FNFTDEEDRE RFLHSIQAEK
PYFKPYIKEA HLHSVICVKP KLDNRRIVKQ SGAFFLFGMG KNKTDSIRIS DKYRPDIKHI
DIPKSSKETL LRELATLSIS EATLFPEIDN VARFLKKEVK IKSLVVEEIE EEKLGNEISV
AYQEFILNSL VLNTDLLEQI QHNSADRAML GLYPELLQKA IIESQENYNE IALKLLVEED
SADKFAKNIF SKLKHKLEEL S