Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2606 |
Symbol | |
ID | 4279513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3118894 |
End bp | 3120039 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638135402 |
Product | hypothetical protein |
Protein accession | YP_751285 |
Protein GI | 114563772 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.296994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTAA AGACGATAAG AACTCTTGCT CACTTTATAA CAGCATGTTC AGAGATAAAA GTTAAAGATG ACCACACATT ATTTTATCGT GGTCATGCTT CCGATATCTA TACTCCATTT CCTACAATAT TTCGAAATCA AAATGATGAT CCGAAGAAAA GTCGCTATAT TGAAAGTGAA GGTGAGCTTT TCCATAATTT AGTTACTCAA TGCCCTGAAG AGTTTAAGGA TTGCACATCC ACTTTTGATT TTTTAGTTAA AATGCAGCAC TACGGTTTAC CTACTCGACT GCTAGATATT ACAAGTAACC CTTTAGTTGC CCTTTATTTT GCTTGTTGTA CCTTAATTCC AGAATCCACT AAAGATAAGA ATGCCAAGAA TGGTCAGGTA CTAGTTTATC AAGTGCCTAA TGAAGAAATT AAATATTACA ACAGCGACAC TGTCTCAGTA ATAAGTAATT TAGCTCGGGT TAATACTAGC TTTAATTTTA CTGACGAGGA AGACAGAGAG CGCTTCTTAC ATTCAATTCA AGCTGAAAAG CCTTACTTTA AACCCTATAT TAAAGAAGCA CATCTTCATT CTGTTATCTG CGTAAAACCT AAGTTAGACA ACCGTAGAAT TGTAAAGCAA AGTGGGGCTT TCTTTTTATT TGGTATGGGT AAAAATAAAA CTGATTCAAT TCGTATATCT GACAAGTATC GTCCTGACAT TAAGCATATT GATATCCCCA AAAGCTCAAA AGAAACCCTA CTTAGGGAGC TGGCAACACT TTCAATTTCA GAGGCAACAT TATTTCCAGA AATTGATAAT GTTGCTCGTT TTTTGAAAAA AGAAGTCAAG ATAAAATCTC TCGTTGTTGA AGAGATTGAA GAAGAAAAGT TAGGGAATGA AATATCAGTC GCTTATCAAG AATTTATTCT AAATAGCCTT GTTCTTAATA CTGACCTGTT AGAACAAATA CAACATAACT CAGCAGACCG TGCCATGTTG GGATTATATC CCGAGTTATT ACAAAAGGCG ATAATTGAAA GCCAAGAGAA TTACAATGAA ATTGCATTAA AGCTATTGGT AGAAGAAGAC AGTGCAGATA AATTTGCGAA AAATATTTTC AGTAAATTGA AACATAAGCT TGAAGAGTTA TCATAA
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Protein sequence | MAVKTIRTLA HFITACSEIK VKDDHTLFYR GHASDIYTPF PTIFRNQNDD PKKSRYIESE GELFHNLVTQ CPEEFKDCTS TFDFLVKMQH YGLPTRLLDI TSNPLVALYF ACCTLIPEST KDKNAKNGQV LVYQVPNEEI KYYNSDTVSV ISNLARVNTS FNFTDEEDRE RFLHSIQAEK PYFKPYIKEA HLHSVICVKP KLDNRRIVKQ SGAFFLFGMG KNKTDSIRIS DKYRPDIKHI DIPKSSKETL LRELATLSIS EATLFPEIDN VARFLKKEVK IKSLVVEEIE EEKLGNEISV AYQEFILNSL VLNTDLLEQI QHNSADRAML GLYPELLQKA IIESQENYNE IALKLLVEED SADKFAKNIF SKLKHKLEEL S
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