| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2602 |
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| Symbol | |
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| ID | 4279509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3111996 |
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| End bp | 3112664 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638135398 |
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| Product | tRNA hydroxylase |
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| Protein accession | YP_751281 |
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| Protein GI | 114563768 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACATCT ATTCACTATA TGAACTTAAA GCTGCACAAA CTGCAATGTT AATGATCCGC
AAATATGCGA TTGATAAAAG TAGTTCACAT CTATTAAAGA CCTGGGCAAA GCCTTATGAA
GATTTCGTTT ATCAACAAGA CCGAAATGCT CACGAATTTT TAACTCGAGA TAGCAAAAAG
AATGACATCA CTAGTGAATT ATTGGCCAAT AAAAGTCTCA CTAATAGCAC TGATTTAATG
AGTAAAATGG TGCGTTTGAT TAAAGAAGAG TTTCATCACT TTGAACAAGT TTTACAAATT
ATGACTGCGC GTGGCATCGA TTACAGTAAT ATTCGTGCTG GTCGTTACGC CAAACAGTTA
ATTATTCATA TGCGGACTCA TGAGCCACTT ACGTTAATTG ATAAGTTAAT AATTGGTGCG
TTTATTGAAG CGCGTTCATG TGAACGATTT GCCAAACTTG CGCCGCACTT AGATGATGAG
CTCGCCAAGT TTTATACTTC ATTACTTCGT TCAGAAGCTC GACATTTTCA AGACTATTTG
GCTCTTGCTG AGGATATTGC AGGTGAAGAT ATCAGTGAAC GGATTGATTA TTTTCGCAAC
AAAGAAATGG AATTAATTTT GACAGAAGAT AGCGAGTTTC GTTTTCACAG CGGTTTACCG
CCACAATAA
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| Protein sequence | MHIYSLYELK AAQTAMLMIR KYAIDKSSSH LLKTWAKPYE DFVYQQDRNA HEFLTRDSKK
NDITSELLAN KSLTNSTDLM SKMVRLIKEE FHHFEQVLQI MTARGIDYSN IRAGRYAKQL
IIHMRTHEPL TLIDKLIIGA FIEARSCERF AKLAPHLDDE LAKFYTSLLR SEARHFQDYL
ALAEDIAGED ISERIDYFRN KEMELILTED SEFRFHSGLP PQ
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