Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2599 |
Symbol | cysS |
ID | 4279506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3109182 |
End bp | 3110564 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135395 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_751278 |
Protein GI | 114563765 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00582653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA TTTACAATAG TATTAGCCGT GATAAACAAG AATTTAAACC AATAAATCCA GGTAAAATCG GAATGTACGT CTGTGGCGTA ACCATTTACG ATTTATGTCA TATTGGTCAT GGGCGTACCT TTGTTTCGTT TGACATGATA GTGCGTTATT TACGTTATAT CGGTTATGAG GTGAATTTTC AGCGCAACAT TACCGATGTT GATGACAAAA TTATCAAACG GGCGGCTGAA AACAACGAAT CTTGTGAGTC GCTAACTGAG CGTTTGATCG CCGAAATGCA CCAAGATTTT GATGCCTTGA ACATGAAACG TCCAGATTTT GAGCCTCGAG CAACGTTACA TATTGAAGAA ATTATCGATA TGGTTCAGCG TTTACTCGAT CGCGATCATG CTTACGTAGC CAGTAATGGG GATGTATTAT TTAGCGTTGC ATCATTCCCT GAGTACGGAC AGTTGTCAGG TCAAAACCTA GACCAGCTTC AAGCCGGTGC TCGCGTTGAG ATAGATAATG CTAAACGCAA TCCTATGGAT TTTGTGTTAT GGAAAATGTC TAAACCGGGT GAACCAACGT GGGAATCACC TTGGGGACCA GGTCGCCCAG GTTGGCACAT TGAGTGTTCA GCCATGAACA GTAAACATCT AGGTTTACAC TTTGACATTC ATGGTGGCGG GTCTGATTTA CAGTTTCCAC ATCATGAAAA TGAAATTGCA CAGTCTTGCT GTGCTCACGA TACCCCGTAT GTTAATTACT GGATGCACAC CGGAATGGTG ATGGTTGACC GTGAAAAAAT GTCTAAATCA CTGGACAATT TTTTTACCAT TCGAGATGTG CTTAAGCATT ATGATGCTGA AACTGTACGT TACTTCTTAT TATCTGGTCA TTATCGTAGT CAGTTAAATT ATTCTGAAGA CAATTTAAAG CAAGCTCGTG CAGCGCTAGA GCGTTTATAC ACTGCGCTTA AAGGTTTAGA CTTAACAGTT GATGCTGCGC CTGCTGAAGC GTTTGTAGCC AAGTTTAAGT CGGCAATGGA TGATGACTTT AATACTCCTG AAGCCTATTC CGTGTTATTT GAGATGGTAC GTGAAATCAA TCGTCTTAAA ACAACCGATA TGGCAGAGGC ATCGGCATTA GGTGTCAGCT TGAAGCAATT AGCAGATGTG CTTGGCCTTA TCAGCCAGAC GCCAGAAGCT TTCTTTAAGG GGGAGGGCAG TGACGATGAA GTGGCAGAAA TTGAAGCGCT TATCGTTGAG CGTAACCGTG CCCGTACTGA AAAAGATTGG CCAGCAGCGG ATGTGGCCCG CGATCGCTTA AACGAGTTAG GCGTTGAGTT AGAAGATGGC GGCCCTAGCG GCACGACATG GCGTAAAAAG TAG
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Protein sequence | MLKIYNSISR DKQEFKPINP GKIGMYVCGV TIYDLCHIGH GRTFVSFDMI VRYLRYIGYE VNFQRNITDV DDKIIKRAAE NNESCESLTE RLIAEMHQDF DALNMKRPDF EPRATLHIEE IIDMVQRLLD RDHAYVASNG DVLFSVASFP EYGQLSGQNL DQLQAGARVE IDNAKRNPMD FVLWKMSKPG EPTWESPWGP GRPGWHIECS AMNSKHLGLH FDIHGGGSDL QFPHHENEIA QSCCAHDTPY VNYWMHTGMV MVDREKMSKS LDNFFTIRDV LKHYDAETVR YFLLSGHYRS QLNYSEDNLK QARAALERLY TALKGLDLTV DAAPAEAFVA KFKSAMDDDF NTPEAYSVLF EMVREINRLK TTDMAEASAL GVSLKQLADV LGLISQTPEA FFKGEGSDDE VAEIEALIVE RNRARTEKDW PAADVARDRL NELGVELEDG GPSGTTWRKK
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