| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2597 |
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| Symbol | tig |
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| ID | 4279504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3105915 |
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| End bp | 3107219 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135390 |
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| Product | trigger factor |
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| Protein accession | YP_751276 |
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| Protein GI | 114563763 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000131318 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAC AACTCAAGGC CTAGAGCGTC GCCTAACTAT TTCTGTACCT
GCTGAGCAAA TCGAGAAATT GGTTAAAGAC AATGTATTGC GCGAAGCTAA GCGTGCTCGT
CTTCCAGGTT TCCGCCCAGG TAAAGTGCCT ATCGGCGAAA TCAACAAGCG TTATGGCAAA
GCCATTCGTC AAGACATCAC TGGTGAAGTG ATGCAACGCA ACTTTATTGA AGCTATCGTA
GCTGAAAAGT TAAACCCTGC AGGTGCGCCA GTATTTACTC CTGGTTCAAC TGAAGGTGAT
TCTTTTGAAT TCGTTGCAAC ATTTGAAATC TACCCAGAAG TTGTCCTAAC GGGTTTAGAT
AGCATTGCAG TTGAACAGCC TAAAGCTGAA GTTAATGATG CTGACGTTGA TGTTATGATT
GAAACATTAC GTAAACAACA TGCAACTTTT GCACCTGTTG AACGTGCAGC AGTTGCTGAC
GATAAAGTTA AAATGAACTT TATTGGTTCT ATTGATGGCG AAGAATTCGA AGGCGGAAAA
GCTGATGATT TCGAACTTCA ATTAGGCAGC AACCGTATGA TCCCTGGTTT TGAAACCGGT
ATCGTAGGGC ATAAAACAGG TGATGAATTC GAAATCGAAG TGACTTTCCC TGAAGATTAC
CATGCTGAAA ACTTGAAAGG TAAAGCGGCT AAGTTCGTTA TTACGTTGAC TGAAGTTCAA
GCGGCTAACC TACCAGAAGT GAATGATGAA TTTGCGTCAT TGTTTGGTAT TGCTGAAGGT
GGCTTAGATG CACTTAAAGC TGAAATCCGT AAAAACATGA CTCGTGAACT TGAGCAGGCG
TTAAAAGCGA ATGTGAAAGA GCAGGTTATT ACGGGTTTAC TAGCAGCAAA CGATATCGCT
ATTCCTAAAG CACTTGTTGA GGGTGAAGTG AATGTGCTTC GTCAACAAGC TATGCAGCGT
TTTGGTGGTC AAACTGAAAA TATGCCTGAA CTTCCGGCTG AACTTTTCAC TGAACAAGCT
GAGCGTCGTG TTAAAATTGG TTTGCTATTA GGCGAAGTGA TCAAGACAAA CGAGCTAAAA
GCAGAAGATG ATCGTGTTAA TACATTGATC GAATCTATGG CTTCAGCGTA TGAAGATCCA
TCTGAAGTTG TTTCATACTA CAACTCAAAC AAAGAACTCA TGCAAAACAT GCGCAACGTA
GCGCTTGAAG AGCAAGCGGT GGAAGCATTG TTAAAATCAT CAAAAGTAAC CGTTAAAGAC
GTTGCTTTTG AAGAATTTAT GAACAAGGCT ACCGGACGAG CGTAA
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| Protein sequence | MQVSVETTQG LERRLTISVP AEQIEKLVKD NVLREAKRAR LPGFRPGKVP IGEINKRYGK
AIRQDITGEV MQRNFIEAIV AEKLNPAGAP VFTPGSTEGD SFEFVATFEI YPEVVLTGLD
SIAVEQPKAE VNDADVDVMI ETLRKQHATF APVERAAVAD DKVKMNFIGS IDGEEFEGGK
ADDFELQLGS NRMIPGFETG IVGHKTGDEF EIEVTFPEDY HAENLKGKAA KFVITLTEVQ
AANLPEVNDE FASLFGIAEG GLDALKAEIR KNMTRELEQA LKANVKEQVI TGLLAANDIA
IPKALVEGEV NVLRQQAMQR FGGQTENMPE LPAELFTEQA ERRVKIGLLL GEVIKTNELK
AEDDRVNTLI ESMASAYEDP SEVVSYYNSN KELMQNMRNV ALEEQAVEAL LKSSKVTVKD
VAFEEFMNKA TGRA
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