| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2596 |
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| Symbol | clpP |
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| ID | 4279503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3105213 |
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| End bp | 3105824 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135389 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_751275 |
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| Protein GI | 114563762 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000850219 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAATG CACCAGAATC AGTACTCAAC GCTCTTGTTC CAATGGTTGT TGAACAAACA
GCGAAAGGTG AACGTTCTTA TGATATCTAC TCTCGCCTAT TAAAAGAGCG AGTGATCTTT
TTAGTTGGCC AGGTAGAAGA ACACATGGCT AACCTCATTG TTGCTCAATT ATTATTCCTT
GAGTCTGAAA GCCCAGATAA AGATATATAT TTGTACATTA ACTCACCTGG TGGCTCTGTC
ACAGCTGGCA TGGCTATTTA TGACACAATG CAGTTCATTA AGCCTAATGT GAGTACCGTA
TGTATGGGTC AAGCTGCGAG TATGGGCGCA TTTTTGCTAG CTGGTGGTGC TAAAGGTAAA
CGTCATTGCT TACCTAACTC TCGTGTGATG ATCCATCAGC CATTAGGTGG CTTCCAAGGT
CAAGCATCAG ACATAGCAAT TCATGCAAAA GAAATTCTTG GTATTAAAAA TAAATTAAAC
CAAATGTTAG CGGAACATAC TGGCCAGCCT TTAGATATTA TTGAACGCGA TACCGACCGT
GATAACTTCA TGAGTGCTAC TCAAGCTGTT GAGTATGGTA TTGTCGATTC ATTACTCACT
AGTCGCGGCT AA
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| Protein sequence | MHNAPESVLN ALVPMVVEQT AKGERSYDIY SRLLKERVIF LVGQVEEHMA NLIVAQLLFL
ESESPDKDIY LYINSPGGSV TAGMAIYDTM QFIKPNVSTV CMGQAASMGA FLLAGGAKGK
RHCLPNSRVM IHQPLGGFQG QASDIAIHAK EILGIKNKLN QMLAEHTGQP LDIIERDTDR
DNFMSATQAV EYGIVDSLLT SRG
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