| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2594 |
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| Symbol | |
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| ID | 4279501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3101319 |
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| End bp | 3103670 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135387 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_751273 |
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| Protein GI | 114563760 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000142236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAG AGCGTGAAGC GCATATCGAA CTCCCCGTAT TACCACTGCG AGATGTGGTA
GTTTACCCGC ATATGGTAAT TCCGCTATTC GTGGGACGGG AAAAATCTAT TCGTTGCCTA
GAATCGGCAA TGGAACAAGA CAAGCAAATT TTATTAGTCG CTCAGCGAGA TGCTGATCTT
GACGAACCTA CCAAAGACGA TATTTTCGAT ATTGGTACCG TTGCCTCTAT TTTACAATTG
CTTAAATTAC CTGATGGCAC GGTAAAAGTA TTAGTTGAAG GTGGCCAGCG TGCCAAAATC
AAGAAATACA CCCAAGAAGA AGAATTCTTT GCCGCCACAG CTGAATACCT CGAATCACAA
GAGTTAAGTG AAAAAGAAGA AGAGGTGTTG GTTCGCAGTG CTATTGGTCA ATTTGAAGGC
TACATCAAGT TAAATAAAAA AATCCCACCT GAAGTATTAA CTTCATTGTC GGGCATTGAT
GAAGCAGCTC GTTTGGCAGA TACCATGGCT GCACATATGC CATTGAAGCT TGAAGACAAA
CAATCTGTCC TTGAGATGAT CAATGTCGGT GAGCGTCTGG AATATTTAAT GGCGATGATG
GAATCGGAAA TTGACTTGCT TCATGTCGAA AAACGAATCC GTACTCGTGT TAAAAAACAG
ATGGAAAAAA GTCAGCGCGA ATACTATTTG AATGAGCAAA TGAAAGCCAT TCAAAAAGAG
CTAGGCGATA TTGACGAAAG TCATGACGAA TTTGAAGTGT TGGCGCGTAA GATTGAAGAA
GCTGGCATGC CAAGCGACGC CAAAGAAAAA GCCACTGCTG AGTTAAACAA ACTCAAAATG
ATGTCGCCTA TGTCAGCAGA AGCCACGGTT GTGCGCAGCT ATGTAGACTG GATGACAGCG
GTACCTTGGA AACAACGCTC TAAAATAAAG CGTGATTTGG CCAAAGCGCA AGAAGTACTC
GACACCGATC ATCATGGGCT TGAAAAAGTC AAAGAACGTA TTCTTGAGTA TTTAGCGGTT
CAAAGCCGAG TTAAGCAGCT TAAAGGGCCT ATTTTGTGTT TAGTAGGACC TCCAGGTGTA
GGTAAAACCT CATTGGGCCA GTCGATTGCT AAAGCAACGG GCCGTAAATA TGTTCGTGTT
GCATTAGGCG GCGTACGTGA TGAAGCGGAA ATTCGTGGTC ATCGTCGTAC TTATATAGGT
TCTATGCCAG GTAAAGTCAT TCAAAAGATG GCTAAAGTGG GCGTTAAAAA CCCATTGTTC
TTGCTCGATG AAATCGACAA GATGAGTTCT GATATGCGTG GTGACCCATC ATCAGCATTA
TTAGAAGTAC TCGATCCTGA ACAGAATGCG ACCTTTAACG ATCATTATCT TGAAGTTGAT
TATGACTTAT CAGATGTGAT GTTCGTTGCT ACGTCAAACT CAATGGATAT TCCAGGCCCT
TTACTTGACC GTATGGAAGT TATTCGTTTA TCGGGTTATA CCGAAGATGA AAAACTCAAT
ATTGCTAAGA AGCATTTACT GACTAAGCAA ATTGAACGTA ACGGTCTTAA AGAAAAAGAA
ATCAAGGTTG ATGACAGCGC TATTTTAGGC ATTATTCGCT ATTACACTCG TGAAGCGGGC
GTGCGTTCAT TAGAACGTGA ATTGTCGAAG ATTTGTCGTA AAGTGGTTAA GCATATCCTG
CTTGATAAAA CGGTCAAAGT GGTTGAAGTT AACCAGGAAA ATTTAAAGTC ATTCCTTGGT
GTGCAACGTT TTGATTTTGG CAAAGCCGAA TCAAATAACC AAATCGGTCA AGTGACCGGT
CTTGCATGGA CTCAAGTAGG CGGCGATTTA TTAACAATCG AAGCCACCTC AGTCGCAGGT
AAAGGTAAAC TGACCTATAC CGGTTCGCTG GGCGATGTGA TGAAAGAATC GATTCAAGCT
GCAATGACAG TGGTACGTGC TCGTGCTGAA AATCTTGGTA TTAACAATGA TTTTTATGAG
AAACGAGATA TCCATGTGCA TGTGCCAGAA GGTGCTACGC CAAAAGACGG TCCTTCAGCC
GGCGCAGCAA TGTGTACTGC GTTAGTGTCT AGCTTAACGG GTAACCCTGT GCGCAGTGAT
GTGGCAATGA CCGGTGAAAT TACTTTACGT GGTGAAGTAT TACCCATTGG TGGTTTGAAA
GAGAAGCTAT TAGCAGCCCA TCGCGGTGGA ATTAAACATG TATTAATTCC TCAAGAAAAT
GAACGCGATC TGGAAGAGAT TCCTGCAAAT GTGATTGCTG ATTTAATCAT TCATCCAGTG
CGTTGGATAG ATGAAGTGTT GAAATTGGCG CTTGAGCGAC CAGTTGAAGG CTTTGAAGTG
GTTAAAAAAT AG
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| Protein sequence | MTKEREAHIE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL ESAMEQDKQI LLVAQRDADL
DEPTKDDIFD IGTVASILQL LKLPDGTVKV LVEGGQRAKI KKYTQEEEFF AATAEYLESQ
ELSEKEEEVL VRSAIGQFEG YIKLNKKIPP EVLTSLSGID EAARLADTMA AHMPLKLEDK
QSVLEMINVG ERLEYLMAMM ESEIDLLHVE KRIRTRVKKQ MEKSQREYYL NEQMKAIQKE
LGDIDESHDE FEVLARKIEE AGMPSDAKEK ATAELNKLKM MSPMSAEATV VRSYVDWMTA
VPWKQRSKIK RDLAKAQEVL DTDHHGLEKV KERILEYLAV QSRVKQLKGP ILCLVGPPGV
GKTSLGQSIA KATGRKYVRV ALGGVRDEAE IRGHRRTYIG SMPGKVIQKM AKVGVKNPLF
LLDEIDKMSS DMRGDPSSAL LEVLDPEQNA TFNDHYLEVD YDLSDVMFVA TSNSMDIPGP
LLDRMEVIRL SGYTEDEKLN IAKKHLLTKQ IERNGLKEKE IKVDDSAILG IIRYYTREAG
VRSLERELSK ICRKVVKHIL LDKTVKVVEV NQENLKSFLG VQRFDFGKAE SNNQIGQVTG
LAWTQVGGDL LTIEATSVAG KGKLTYTGSL GDVMKESIQA AMTVVRARAE NLGINNDFYE
KRDIHVHVPE GATPKDGPSA GAAMCTALVS SLTGNPVRSD VAMTGEITLR GEVLPIGGLK
EKLLAAHRGG IKHVLIPQEN ERDLEEIPAN VIADLIIHPV RWIDEVLKLA LERPVEGFEV
VKK
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