Gene Sfri_2591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2591 
Symbol 
ID4279498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3097993 
End bp3098607 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content37% 
IMG OID638135384 
Productpentapeptide repeat-containing protein 
Protein accessionYP_751270 
Protein GI114563757 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATA AGACAACTAG TGAATTGTTT GTGTTATCAC ACTACGGCGA TGACTTATTC 
GATTCGATCA AAGTCGTGGC ATTACAGTTC AAACATATTA CTTTTGAGCG CTGCCATTTT 
AACCAATGTG ATTTTAGTCA AAGTGATTTC TATCATTGCC ATTTTATTGA GTGTGTTTTT 
AGCCAATGTA ATTTAAGTGT AATGTCAGTG GTTGCTACAG AGTTTGATGA CGTTACTTTT 
AGCGACTGTA AAGCCATAGG TATTGATTGG ACTAAAGCTC AGTGGCCACA GTTTATGACT 
CAAACCACGA TTAAGTTTGA AAGAAGTTTG CTCGATGGCA GTAATTTTTA TGCTCTGCAT 
TTACCCGAGC TTTCACTTGT TGGTTGCCGC GCCCATGATG TCGACTTTAG AGAAACTAAT 
TTAAGCAAAG CAGATTTGCG TTTGACCGAC TTTAATTTAA GCCAATTTAG TCATACAAAT 
TTAACTAAGG CGAATTTTAC TGATGCGTTG AATTATCAAA TCGATATTAC TGCTAATAAC 
GTTAAGCAAG CCAAATTCAG TCGGTTCGAA GCCTTAAGTT TACTAGAAGG TTTGGATATT 
CAATTAGTCG ACTAG
 
Protein sequence
MSHKTTSELF VLSHYGDDLF DSIKVVALQF KHITFERCHF NQCDFSQSDF YHCHFIECVF 
SQCNLSVMSV VATEFDDVTF SDCKAIGIDW TKAQWPQFMT QTTIKFERSL LDGSNFYALH 
LPELSLVGCR AHDVDFRETN LSKADLRLTD FNLSQFSHTN LTKANFTDAL NYQIDITANN 
VKQAKFSRFE ALSLLEGLDI QLVD