| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2590 |
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| Symbol | |
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| ID | 4279497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3096964 |
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| End bp | 3097869 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135383 |
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| Product | transcription activator, effector binding |
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| Protein accession | YP_751269 |
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| Protein GI | 114563756 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACA GACTTGATCA GGCATTTGAG CGTGCATTAG CCTATTTAGA TCAACACTTA
AATGAACCTT TTGACCTACA AGTGTTGGCC GAGATTGCCC ACATCCCACG ATGTCATTTC
GACCTATTGT TTACAGCGCT GTACCATATG TCTATTGACG CTTATGTTGA ATTGCTCAAA
AGTCTAGAAG CTGCCCACTT ATTAGGTTTT GGCAAGCAAG TTTCTCTGGC CACAATAGCG
GCTAAATTGG CGTATCGTAA CGAGCAACAC TTTATCGAAT CGTTTACTCG CAGTATAGGT
CAAAGCCCTG AATCGTTTCA GCAAGCACCT GATTGGGGCA ATTTCTTTGC GAAGCAACAA
CCGCTTAAAT CCTTTCAAGC CGATGTTAGT CAGCAAAGTG AGCAATCTTA TTCTGTTGAT
ATTGTATCGT TTGATGCGCA GTCATTAGCG GTGATGGAAC ATCATGGTGA TCCAGCTTTA
TTACCTCAAA CCATTGCGCG ATTTATTGAA TGGCGTCGAC AATTTGCTTT ATCTCCTACA
AATTGCAGAA CCTTTAATCT GCTTTACTCA AGCCCGGAGT TATCTGCTAA AACTCAATAT
CGGATTGATA TAGGAGTATC ATTAAATGCC GAGACACAAG CTTTAGTATC TGAGTCGAGT
CAGATTATGC TCAAATCAAT CCCTCAGGGA CGATGTGCGA TGATTAAATA CAGTGGTGAT
GATATAGGTC TTACAGCGGC AATAGACTAC CTGTATCGCG ATTGGGTTAA TGCAAATGAT
GTTACTCTAC GCAATTACCC GTTATTTTTA GAACGACTCG ACATTGGTCG AAGCACCTCC
GTTGAGAAAC AATCTGGATC GCCACTCAAC ATCCAGCAAG TATTAATTTA TTTACCGATA
ATCTAA
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| Protein sequence | MSHRLDQAFE RALAYLDQHL NEPFDLQVLA EIAHIPRCHF DLLFTALYHM SIDAYVELLK
SLEAAHLLGF GKQVSLATIA AKLAYRNEQH FIESFTRSIG QSPESFQQAP DWGNFFAKQQ
PLKSFQADVS QQSEQSYSVD IVSFDAQSLA VMEHHGDPAL LPQTIARFIE WRRQFALSPT
NCRTFNLLYS SPELSAKTQY RIDIGVSLNA ETQALVSESS QIMLKSIPQG RCAMIKYSGD
DIGLTAAIDY LYRDWVNAND VTLRNYPLFL ERLDIGRSTS VEKQSGSPLN IQQVLIYLPI
I
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