| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2586 |
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| Symbol | |
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| ID | 4279493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3091321 |
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| End bp | 3093087 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135379 |
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| Product | flavocytochrome c |
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| Protein accession | YP_751265 |
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| Protein GI | 114563752 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.110511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAA AATATCTGGT ATCAGCGATG GCATTGGTTG TGCTTTCCTC TGGTACTGCA
ATGGCTAAAA CCCCCGATAT GGGGTCATTC CATGCTGACA TGGGCAGTTG TCAATCTTGT
CACGCCAAAC CTATCAAGGT TACTGATAGC GAAACTCATG AAAATGCTCA GTGTAAATCA
TGCCACGGAG AGTACGCTGA ACTGGCTAAT GACAAATTAC AGTTTGACCC ACACAATTCA
CATTTAGGTG ACATTAACTG TACTAGTTGC CATAAAGGCC ATGAAGAACC AAAATTTTAC
TGTAATGAGT GTCATTCATT TGATATCAAG CCGATGCCAT TTTCTGATGC CAAGAAGAAA
AAATCTTGGG ACGACGGATG GGATCAAGAC AAAATTCAAA AAGCGATTGC TGCAGGCCCA
AGTGAAACAA CGCAAGTATT AGTAGTCGGT GCGGGTAGTG CAGGTTTTAA CGCATCATTA
GCCGCTAAAA AAGCCGGTGC TAATGTTATT TTGGTGGATA AAGCACCGTT CAGTGGTGGT
AATTCTATGA TTTCAGCTGG TGGTATGAAT GCTGTTGGAA CTAAGCAGCA AACAGCTCAT
GGTGTTGAAG ATAAAGTTGA ATGGTTTATC GAAGATGCCA TGAAAGGCGG CCGTCAACAG
AATGATATAA AACTGGTGAC TATTCTTGCT GAACAGTCTG CTGATGGTGT GCAATGGTTA
GAGTCTTTAG GTGCAAACTT AGATGACTTA AAACGCTCAG GTGGTGCTCG TGTCGACCGT
ACTCATCGTC CACATGGAGG TAAAAGCTCT GGGCCAGAAA TTATTGATAC TTTACGCAAA
GCGGCCAAAG AACAGGGTAT TGATACACGA CTAAACTCTC GTGTAGTTAA GTTAGTGGTT
AATGACGATC ATAGTGTTGT CGGCGCCGTG GTTCATGGTA AACATACTGG CTATTACATG
ATTGGTGCTA AATCTGTTGT GCTAGCAACG GGTGGTTATG GCATGAATAA AGAAATGATT
GCTTATTACC GTCCAACAAT GAAAGACATG ACCAGTTCGA ACAACATTAC CGCCACTGGT
GATGGTGTAT TGATGGCAAA AGAAATTGGT GCCAGCATGA CCGATATCGA CTGGGTTCAA
GCTCACCCAA CAGTGGGTAA AGACAGCCGT ATTCTGATTT CAGAAACCGT CCGTGGTGTG
GGCGCTGTGA TGGTAAACAA AGACGGTAAT CGCTTTATTA GCGAGTTAAC AACTCGTGAC
AAAGCATCTG ATGCTATCTT AAAACAACCT GGCCAGTTTG CTTGGATTAT TTTTGATAAC
CAGTTATACA AAAAAGCCAA AATGGTACGC GGTTATGACC ATTTAGAAAT GCTTTACAAA
GGCGATACTG TTGAACAGTT AGCGAAGAGC ACCGGTATGA AAGTCGCTGA TTTAGCTAAA
ACAGTCTCTG ACTACAATGG TTATGTAGCA TCTGGTAAAG ACACTGCGTT TGGTCGTGCT
GATATGCCAT TGAACATGAC CCAAAGTCCT TACTATGCCG TTAAAGTTGC TCCTGGTATT
CATCACACTA TGGGTGGTGT CGCGATTAAC ACAACAGCGT CTGTACTTGA CCTTCAAAGT
AAGCCAATTG ACGGTTTGTT TGCCGCAGGT GAAGTGACTG GTGGTGTTCA TGGTTACAAC
CGTTTGGGCG GTAATGCAAT AGCAGATACC GTGGTCTTCG GTCGAATTGC AGGAGATAAC
GCAGCCAAGC ATGCTCTAGA TAAATAG
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| Protein sequence | MKLKYLVSAM ALVVLSSGTA MAKTPDMGSF HADMGSCQSC HAKPIKVTDS ETHENAQCKS
CHGEYAELAN DKLQFDPHNS HLGDINCTSC HKGHEEPKFY CNECHSFDIK PMPFSDAKKK
KSWDDGWDQD KIQKAIAAGP SETTQVLVVG AGSAGFNASL AAKKAGANVI LVDKAPFSGG
NSMISAGGMN AVGTKQQTAH GVEDKVEWFI EDAMKGGRQQ NDIKLVTILA EQSADGVQWL
ESLGANLDDL KRSGGARVDR THRPHGGKSS GPEIIDTLRK AAKEQGIDTR LNSRVVKLVV
NDDHSVVGAV VHGKHTGYYM IGAKSVVLAT GGYGMNKEMI AYYRPTMKDM TSSNNITATG
DGVLMAKEIG ASMTDIDWVQ AHPTVGKDSR ILISETVRGV GAVMVNKDGN RFISELTTRD
KASDAILKQP GQFAWIIFDN QLYKKAKMVR GYDHLEMLYK GDTVEQLAKS TGMKVADLAK
TVSDYNGYVA SGKDTAFGRA DMPLNMTQSP YYAVKVAPGI HHTMGGVAIN TTASVLDLQS
KPIDGLFAAG EVTGGVHGYN RLGGNAIADT VVFGRIAGDN AAKHALDK
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