| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2583 |
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| Symbol | |
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| ID | 4279490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3088068 |
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| End bp | 3089075 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135376 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_751262 |
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| Protein GI | 114563749 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTTTAC TCGATATTCG TAATCTCACC ATTGAATTAG ATACACCTGA GGGCACAGTA
AAAGTGCTCG AAAAAGTCAG TTTGACTATC AATCCCGGTG AAATCCATGG ACTTGTTGGC
GAATCAGGTT CTGGGCGCAG TTTATTGGCC AAAGCGATTC TAGGGGTGCT AGGTCCTAAT
TGGCATATTA TTGCTGACCG TATGATGTGG GACGGAAAAA ACTTATTAGA AATGAGTTCC
AAGCAACGAC GCTGCCTGAT GGGTAGTGAA ATGGCGATGA TTTTCCAAGA CCCATCTGGC
AGTTTAGACC CGGTAAAAAC CATTGGCAGT CAATTGATTG AAGCGATGGT GCCCAACAAA
AACATTCCTT TTTGGCGACG TGGAAAAGCA ACTTATTTAA ACGCGCAGAA ATGGCTTCAC
AAGGTCGGTA TAAAAAAACC AAAACAGCTG ATGAAATGCT ATCCATGGGA GTTGTCTGAG
GGCGAATGTC AAAAAGTGAT GATTGCGATG GCTGTGGCAA ATCATCCTAA ACTGCTGATT
GCCGATGAGC CAACTAACTC AATGGAGCTC AACACCCAAG CGCAAATTTT CAGACTATTA
TCGCAACTCA ATCAACTGCA AAACGTATCT ATTTTATTGG TTAGCCATGA ATTAGAAACC
ATGGTGCACT GGTGTGATAA CTTAACGATT TTGTACAGTG GTCAGGTTAT GGAATCAGGG
CCTGTTAGCG AAATGGTAGC AATGCCGTAT CACCCTTACA CTCGCGCGTT ATTAAAAAAC
CTACCCGATC ATACTGAAAA AATGCGCCAC AAAGCTAATT TACCCACACT GCAAGGCTCT
TCGCCGTCGT TGCAGCATTT ACCTGCCGGT TGTCGACTTG GCCCACGTTG CCCAGAAGCT
CAACGCCAAT GTGTAAAACA GCCTAATCTT GAACATATCA AAGACCGCTA TTTTGCCTGC
CATTTCCCTT ACCAAAGTGA GCAAGAAGAT GACGATGCCA TTGCTTAA
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| Protein sequence | MPLLDIRNLT IELDTPEGTV KVLEKVSLTI NPGEIHGLVG ESGSGRSLLA KAILGVLGPN
WHIIADRMMW DGKNLLEMSS KQRRCLMGSE MAMIFQDPSG SLDPVKTIGS QLIEAMVPNK
NIPFWRRGKA TYLNAQKWLH KVGIKKPKQL MKCYPWELSE GECQKVMIAM AVANHPKLLI
ADEPTNSMEL NTQAQIFRLL SQLNQLQNVS ILLVSHELET MVHWCDNLTI LYSGQVMESG
PVSEMVAMPY HPYTRALLKN LPDHTEKMRH KANLPTLQGS SPSLQHLPAG CRLGPRCPEA
QRQCVKQPNL EHIKDRYFAC HFPYQSEQED DDAIA
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