| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2582 |
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| Symbol | |
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| ID | 4279489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3087174 |
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| End bp | 3088064 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135375 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_751261 |
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| Protein GI | 114563748 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGAA TTAAAATATA CCAAGAAGAC CATATAGCCT CGCCTATGTG GCGAATGTGG
CAAACATTTT CTGCGAACCC ATTTGCGGTG ATCGGTCTAT GGGCGGTGAT TTTTTTATTA
ATATTAACTA TTTTCGCCCC GTTTATAGCG CCTTATTCAG CAGAGATGCA AGACCAACAA
GTATTACTTT TACCGCCATC ATGGGATCCC GCAGGTACTG TAGAACACTT CCTTGGAACA
GACGATCTAG GACGAGATAT TTTTAGTCGT ATCTTACACG GCGTACAATT AACCTTTGGC
ATGTCATTAT TAATTGTTGC TGCATCGCTG ATATTTGGCT TTGTTATTGG TTCTCTTTCA
GGAATGATGC ACGGCATAAA GTCGAGTGTG TTAAGCCACT TGCTCGATGC ATTATTGTCT
ATCCCATCGT TATTAATGGC TATTCTGGTC GTCGCCGTTA TGGGGCCTGG GCTTAATAAT
GTGTTTTGGG GCGTCGGGAT TGCGATGGTT CCACAATTTG TTCGAGCTAT CCATCTAGCG
GTTCATGAAG AGCTGCAAAA AGAGTATGTT ACAGCGGCAA AATTAGATGG TGCCAACTCG
TTGCAAGTTT TTTGGTATGT CATTATGCCC AACGTATGGG ATGTGGTGAT TATTCAGGTC
ACTATGGCAA TATCGGCAGC AATTCTCGAT ATTGCCGCAC TCGGTTTTTT AAACCTTGGT
GCTCAAGCAC CGAGTCCAGA ATGGGGCGCC ATGGTCGCAC AAGGGCTTGA TAATTTACTG
CTTGCGCCTT GGACCGTTAC TATTCCAGGT GTCGCGATTT TGTTTACCGT ATTATCGGTC
AACTTGGTCG GCGATGGTTT ACGTTCAGCC CTAGCACCGA TAAGAAATTA A
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| Protein sequence | MPRIKIYQED HIASPMWRMW QTFSANPFAV IGLWAVIFLL ILTIFAPFIA PYSAEMQDQQ
VLLLPPSWDP AGTVEHFLGT DDLGRDIFSR ILHGVQLTFG MSLLIVAASL IFGFVIGSLS
GMMHGIKSSV LSHLLDALLS IPSLLMAILV VAVMGPGLNN VFWGVGIAMV PQFVRAIHLA
VHEELQKEYV TAAKLDGANS LQVFWYVIMP NVWDVVIIQV TMAISAAILD IAALGFLNLG
AQAPSPEWGA MVAQGLDNLL LAPWTVTIPG VAILFTVLSV NLVGDGLRSA LAPIRN
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