| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2581 |
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| Symbol | |
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| ID | 4279488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3086156 |
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| End bp | 3087187 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135374 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_751260 |
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| Protein GI | 114563747 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCGTT ATCTTTTTAG TCGCATAACC CTGTTTATGG CCACATCTCT AGTCATGGTG
GCCGTACTCT TTATGGCGTC GGGACAGTTT CCTGTCAGTA AAGCGTATTC ACTATCAGGG
GTTCAATATC CAACGCTTGA ACAACAACAG CAAATAGAGC AAGACTATCA ACTGCATGAT
AACCAATTAC TGCAGTTTAC TGCCTACTTG CGCCAACGCT TATCGGGTAA CTTTGGTATT
TCCAGTAACT CGCAGCAAGA GGTTCTAGAA GAGCTTGAAG CAGTACTACC TGCGTCTTTT
GAATTATCAT TGTTTTCAGG TTTTATAGCT GTGTTTTTTG GTGTACCCAT TGGCGTGCTA
GCCGCATTAG GTAATAACAA AGCACTGCAA CGCAGTATTT TAGCCATCAC CTTAACAGGC
TATTCTATTC CGGTATTTTG GCTCGGCTTG ACCTTATCTA TGTGGTTTGG GGTGAATCTT
GGCTGGCTGC CCATTTCAGG TCAAATCAAT TTACTTTATG AAATTGAACC TGTGACAGGT
TTCATGCTGG TCGACACTTT ATTATCCGAT TCTAGTTATC GCATTCCGGC GTTTCATGAT
GCTTTATTAC ACTTAATATT ACCGGCCGTC ACCTTAGCAG TGCTTCCTTT TACATTGGTC
GTAAGGATCA CTCGGCAAGC CATTTTAAAT GTGATGAATC AGACTTATAT TCGTGCAGCT
GAAGCTCGCG GTTTACACAC GGCTAAAATA CTACTTCGTC ATGTACTGCC CAACGCCTTA
ATCCCGGTAA TAAAAAGTAT TGGTTTAATG CTGGGATCAT TCGCCAGCTA TGGCATTGTG
GTTGAAGTGA TATTTTCGTG GCCTGGGGTT GGCAGTTGGT TAGTATCAGG CATTTACCAG
CGTGACTATA CTGTTATTCA AGCGGGCATC TTAGCTGTGT CATTATTAAT TATTTTCTTA
AGCATATTGA TTGATTTACT GCATACCGCA ATCAACCCAA TGAGCAGAAA GGAATTGTAT
GCCTCGAATT AA
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| Protein sequence | MWRYLFSRIT LFMATSLVMV AVLFMASGQF PVSKAYSLSG VQYPTLEQQQ QIEQDYQLHD
NQLLQFTAYL RQRLSGNFGI SSNSQQEVLE ELEAVLPASF ELSLFSGFIA VFFGVPIGVL
AALGNNKALQ RSILAITLTG YSIPVFWLGL TLSMWFGVNL GWLPISGQIN LLYEIEPVTG
FMLVDTLLSD SSYRIPAFHD ALLHLILPAV TLAVLPFTLV VRITRQAILN VMNQTYIRAA
EARGLHTAKI LLRHVLPNAL IPVIKSIGLM LGSFASYGIV VEVIFSWPGV GSWLVSGIYQ
RDYTVIQAGI LAVSLLIIFL SILIDLLHTA INPMSRKELY ASN
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