| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2575 |
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| Symbol | |
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| ID | 4279482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3080354 |
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| End bp | 3081796 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135368 |
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| Product | protein of unknown function DUF463, YcjX family protein |
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| Protein accession | YP_751254 |
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| Protein GI | 114563741 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3106] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0355186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT TAGATCGTTC CTTGTTTAAA GTCAGCCAAA CGGCTCAGTC TATTGTTAAT
CGCAGTACCG ATCGTCATGT TAGATTAGCC GTCACAGGGT TATCTGGTGC AGGTAAAACC
GCTTTTATTA GTGGCTTAGT AAACCAGTTA TTGCATGCTG GCAAAGGTGC CAAGCACAAT
CCTTTACCAT TATGGCAAGT GGCTCGCGAA GGTCGACTAA TTGCTGTCAA CCGCGCCATG
CAACCCGATT TAGACATTGC CAGTTTTGAT TATCAAGGCG CAATGAATGC ATTATGTTCG
TCGCCTCCGT ATTGGCCTGC TTCAACCAAA AACATTACCG AATTACGTTT AGCGATTAAG
TATCAGCCTC AGCAAGGTTT GTTAGCAAAG CTAACTGATA CCGCAACCTT GTACGTAGAT
ATTGTTGATT ATCCAGGTGA GTGGTTACTT GATTTACCGA TGCTTAAACA AGATTTTACT
CAATGGTGTT TATCACAACA GGTTAATGTG ACATGTTTAC GTAACTCTCC CTTATTTAGC
GCATTTACCC AAGCTGTAGA GACGTTAGAG TTAAGCCAAT TAGCTGATGA GCAGCAACTT
AAGTACATTG CTGATTTGTA CCAAACTTTA TTGGTCGACT TGGTTAGACA GCAGGGATTT
TATCACGCTC AACCAGGGCG TATGTTGTTA CCGGGCGAAT ACGAAAATAC CCCGTTATTG
ACATTTTTCC CATTGCTTAC CTTAAGCCCA ATTCAGCATT CAGAGTTATC AGCAAGTCCA
AGCGATTCAA ATTATCATGT CCTTAAGCGC CGTTATGAAC AGTACGTATC ACAAGTTGTT
AAGCCATTTT ACCGCGACTA CTTTTCTCGA TTTGATCGCC AACTAGTGTT GGTTGATTGT
TTAAACGCAC TTAATCATGG TCAGGCACAG TTTAATGACA TGGGGCGCGC ATTAAACAGC
ATTATGGAAA GTTTTCAGTT TGGCCAGTCG AGCTTAATTA AACGTTTATT TTCACCGCGG
ATAGACAAAG TGCTTTTTGC TGCCAGCCAA GTAGACAGAG TGACCCGTGA TCAGCAAAGC
CATGTGCTTA GTTTGTTAAC CGCAATGCTG CAACAAAGCC AGCATTATGC CAACTTTGAA
GGCAGTGAAG TTGAAACCAT GGCGATAAGT GCGATTAAGG CCACTCAACA CGGGATGGTT
AATATAGAGG GTGTTCAACA AGAAGTGGTA AAAGGCACTG GGCTTGATGG TAAGCAAGTC
ACCGTATATC CAGGAGATGT GCCCACATCA TTACCCGATG CAGAGTTTTG GCAACAACAA
GGGTTTAGCT TTAGTGCTTT CCTACCGCCC AATTTGAGCC ATATCCATGA TAATAATCCG
CAATTCGAAC ACATTCGTCT CGACCATCTC TTGGAGTTTC TATTAGGCGA TAAATTGTCT
TAA
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| Protein sequence | MRFLDRSLFK VSQTAQSIVN RSTDRHVRLA VTGLSGAGKT AFISGLVNQL LHAGKGAKHN
PLPLWQVARE GRLIAVNRAM QPDLDIASFD YQGAMNALCS SPPYWPASTK NITELRLAIK
YQPQQGLLAK LTDTATLYVD IVDYPGEWLL DLPMLKQDFT QWCLSQQVNV TCLRNSPLFS
AFTQAVETLE LSQLADEQQL KYIADLYQTL LVDLVRQQGF YHAQPGRMLL PGEYENTPLL
TFFPLLTLSP IQHSELSASP SDSNYHVLKR RYEQYVSQVV KPFYRDYFSR FDRQLVLVDC
LNALNHGQAQ FNDMGRALNS IMESFQFGQS SLIKRLFSPR IDKVLFAASQ VDRVTRDQQS
HVLSLLTAML QQSQHYANFE GSEVETMAIS AIKATQHGMV NIEGVQQEVV KGTGLDGKQV
TVYPGDVPTS LPDAEFWQQQ GFSFSAFLPP NLSHIHDNNP QFEHIRLDHL LEFLLGDKLS
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