| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2572 |
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| Symbol | |
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| ID | 4279479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3077921 |
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| End bp | 3078658 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135365 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_751251 |
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| Protein GI | 114563738 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGGAAT ATCAAGCTGC AAAAGATTTA CTCAATAACA AAACAATCTT GGTTACGGGC
GCTGGAGACG GTATTGGTCG TGCAGCATCA ATCGAATTTG CCAAACACGG CGCAACGGTA
ATTTTACTCG GTAAAACCGT TAAAAAACTC GAAAATGTAT ACGATGAAAT TGTTAATGCC
GGTTATCCAA AGCCAGCCAT TGTGCCGTTA GATATGAAAG GCGCGACCGA ACAGAATTAT
ATTGATATGG CAGACACCAT TGCCGAACAG TTTGGTCATT TAGATGGTTT ATTGCATAAC
GCATCTCAGT TGGGGGCATT AGGTCCATTT GAGCATATTG ATTTAACCTC GCTTGAAACC
ATTTTAAAGG TTAATGTCAC GGCTCAAGCC ATCATGACCA AGTCATTATT GCCTATTATG
CGTAAAGCCG AGCATGCTTC AATTGTGTTT ACTTCAAGCG GTGTTGGACG TAAAGGTCGT
GCTTATTGGG GACCTTATGC ATTTTCTAAA TTTGCCACCG AAGGCATGAT GCAAGTATTA
GCTGATGAGT GTGATAATAC CTCTGTAAGG GTTAATAGTA TTAACCCAGG TGCGACTCGT
ACAGAAATGC GAGCAAAAGC TTATCCAGCT GAAGATCCAC AAACACTAAA AACAGCTGAG
CAAATTATGC CGACTTATTT ATTCTTAATG GGTAATGAAT CTATCGACAC CAATGGCCAA
GCACTTAATG CACAATAG
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| Protein sequence | MLEYQAAKDL LNNKTILVTG AGDGIGRAAS IEFAKHGATV ILLGKTVKKL ENVYDEIVNA
GYPKPAIVPL DMKGATEQNY IDMADTIAEQ FGHLDGLLHN ASQLGALGPF EHIDLTSLET
ILKVNVTAQA IMTKSLLPIM RKAEHASIVF TSSGVGRKGR AYWGPYAFSK FATEGMMQVL
ADECDNTSVR VNSINPGATR TEMRAKAYPA EDPQTLKTAE QIMPTYLFLM GNESIDTNGQ
ALNAQ
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