| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2571 |
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| Symbol | |
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| ID | 4279478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3075172 |
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| End bp | 3077661 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135364 |
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| Product | hypothetical protein |
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| Protein accession | YP_751250 |
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| Protein GI | 114563737 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC TCATTTTGGG TGTTGCAATA ACATCTGCTC TTGGCTTGAC AGCATGTGGT
GGTGACAGTT TTAACGAAGC AGTAGATAAT GCTGAGCCGT TAGTACCTGT TTCACATATG
CAGTTTGATC CGGCTAATAG CAAATTACCA TTACCAAACG ATTTACTTTT TAGTGGCACA
ACCGATGGCA CATTAAATAT ACCCGGTGAG GATGGCGTAG ATTATGTTAA CCCTCAGCTG
GCATTAGGCG CATTAGACGG CTGGTCAACG AGTTCTCCTA TTTCAATCAC TGTCGAACTT
GCTAATGATT TACAGGGCAA TGCATTAACG TTGGATGCCG CCTCGGTATT TCAACCAGGT
GCAGTACGCA TGTTTGAAGC GACTGTCGGC GGAGCATTAT CAAGTGATGC TGAGTGTAAA
TCAGCACCTT CAGTTTCAGC CTGTAAAGTA GGTGAAGAGC TTCAATTTGG CGTTGACTTC
GTATCAAAAG CATCAGGCAA TAAAGTTGCC ATAGTACCGA TTAAACCATT AAAGGCTGGC
CAGTCTTATA TCTATGTGAC TACCGATCTT ATTCAAGACT CGTTAGGCCG TGGTATTGCT
CCGTCAACAA CCTATGGTCT GTTAAAGTTA GATTTTGAAA CTCAGCAGCT TGAAACAGAA
CAACAAAAAA TGCTGCAGTA TCTGGTCAAC AGTTATGAAA AAGGTGTTGC TGCAACACAT
GGCGTTGACC CTGAATCGAT TAGTTTTTCT GGTTTATTCA CCACTCAGTC AGTCGCTGAT
GTGTATGAAA CCACTAAATT ATTGATGGCT TCTAATCCTG CTTACACACC TTCATTTGTG
CAAGCTCCTA CGCCAACAGG ATTCACAGTT GCTCAGGCTG CTGGGTTAAC GCCAGCATCG
GGTGCAGCCT ATGTAGTCGC CGATATGGCA GATCTTTATA CTGCCAAAAT TAAACTGCCA
ATCTACGGTG ATTGTTCATC AGCTGGCTGT GTGATCCCAA TCGTCGATGG TGCTCCAACA
GCACCTAATG GCCGTTGGTT TGCTCAAGGT GACAGCCCTG TGTCGGTATT GCTAGCTTTA
CAGGCTGGTA CATTAAGCCA AGCTAACTTT TTTGCACAAG CATCTGATAA CGGTGTAGAT
CCTCAAGCAG CATTGGGTAA TCCTGCATTG CTTGCAGGTA AACAGTGGAA ACTTGACGAT
GGTACTGCTG CAGATAAAAC AAAACATTTA ACCAAGTTTA ACCCTATTCC GGCTATCAAA
GGTTATGAAA CTGTTTCAGT TCAAATTACC TTACCGAATG CGGCTAAGCT TGCAGCATTT
ACCGCTGCGC AAGGTGGAAC TTTTGTCCCT CCAACAAGTG GTTGGCCAAC AACAATTGCA
ATGCATGGTT TAGGTGGTGG TAAAGAAATG GCACTAGCTT ATGCTGGTAC ATACGCAGCA
GCTGGTGTTG CTACTATTGC GATTGATATG CCATTGCACG GTGCTCGTTC ATTTGACTTA
GACAAAGACG GCACTTATGA AATCTCTGCA ACAGCCCCTG CATTTGGTCC TGTAGTAGGT
ACACCTGATG CGTTCACGAA TGGTAATCCA TTAGTGTTTG TTAACATTGC CAGCACATTA
ACTGTGCGTG ACAATTTCCG TCAAGCAACT TTAGACCATT TAGGTTTAAG ATTATTATTG
ACTGGAATGG CGCAACAACT CGCTGCGGCA AATCAACCTC AAGTATTTGA TGTGTCTAAA
ATCAGTGCTC AAGGTTTGAG TTTAGGTGGC ATTGTGGGCA CTACGTTCTC TACTTATGCC
AGTACTGGAT TAGTTAATCC TATGACGGGT GATGCTTTGC CTAACGCTTA TGCAATTAAT
GCAGCATCGT TAGTCGCACC TGCTGGTGGT TTAGCTGGAG CATTTGCGGG TTCTGCTGCA
TTTGGTCCAC AGTTATTTGC CAATGTCACA GCCTCTAGTA CGTTTGCCGC TCTCGTTACT
GCTGCAAATA CTGCAGGTTA TGAGGAAGGT AGCGCCGAGT ATGCTGCTTT AGTTCAAGCT
GTGTATGCTG AATTTATACC GACATTTGCT TTTGCAGTGC AAACAGCAGT CGATTCTGCT
GACCCAATTA ACCATGGCGA AAAATTAGCT GCTACTGGTT TACCTGTGCA TTTAGTTGAA
ATAGTTGGCG ACGGTGCAGG TAACTTAGGT GACCAAACAT TACCTAACAG CGTTGAAGGT
TTCCCATTAT CGGGTACTGA ACCGTTAATT GCCTCGCTGG CGCTAGGATG TGTAGATACA
ACTACACCAG GTTCTGGTGC TGTACGCTTC TCTAAAGGTC ATCATAGTTC GATTGTTAGC
CCTGGTGAAG TAGATGGCGT TACCGACGGT ATGGCTGCTG CCGCGACTGT TGAAATACAG
TCTCAAGTTG CAGGTTTTGC AAAATCAACG GGATTAGGAC AAGCAACGAT TGTTGTGACT
AATAGCGATG TGATCCAAAG CTGTAACTAA
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| Protein sequence | MKRLILGVAI TSALGLTACG GDSFNEAVDN AEPLVPVSHM QFDPANSKLP LPNDLLFSGT
TDGTLNIPGE DGVDYVNPQL ALGALDGWST SSPISITVEL ANDLQGNALT LDAASVFQPG
AVRMFEATVG GALSSDAECK SAPSVSACKV GEELQFGVDF VSKASGNKVA IVPIKPLKAG
QSYIYVTTDL IQDSLGRGIA PSTTYGLLKL DFETQQLETE QQKMLQYLVN SYEKGVAATH
GVDPESISFS GLFTTQSVAD VYETTKLLMA SNPAYTPSFV QAPTPTGFTV AQAAGLTPAS
GAAYVVADMA DLYTAKIKLP IYGDCSSAGC VIPIVDGAPT APNGRWFAQG DSPVSVLLAL
QAGTLSQANF FAQASDNGVD PQAALGNPAL LAGKQWKLDD GTAADKTKHL TKFNPIPAIK
GYETVSVQIT LPNAAKLAAF TAAQGGTFVP PTSGWPTTIA MHGLGGGKEM ALAYAGTYAA
AGVATIAIDM PLHGARSFDL DKDGTYEISA TAPAFGPVVG TPDAFTNGNP LVFVNIASTL
TVRDNFRQAT LDHLGLRLLL TGMAQQLAAA NQPQVFDVSK ISAQGLSLGG IVGTTFSTYA
STGLVNPMTG DALPNAYAIN AASLVAPAGG LAGAFAGSAA FGPQLFANVT ASSTFAALVT
AANTAGYEEG SAEYAALVQA VYAEFIPTFA FAVQTAVDSA DPINHGEKLA ATGLPVHLVE
IVGDGAGNLG DQTLPNSVEG FPLSGTEPLI ASLALGCVDT TTPGSGAVRF SKGHHSSIVS
PGEVDGVTDG MAAAATVEIQ SQVAGFAKST GLGQATIVVT NSDVIQSCN
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