Gene Sfri_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2568 
Symbol 
ID4279475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3072121 
End bp3072708 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content42% 
IMG OID638135361 
Productarylesterase 
Protein accessionYP_751247 
Protein GI114563734 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTACCA GCGTGTTTAT ACTGATAGTT ATGAGTGTAC CAACCTATGC TGCCACGATT 
TTGATATTAG GTGATAGCTT AAGTGCAGGT TATGGCATGC CAGAAGATCA GGGATGGGTA 
CAATTGTTAC GTAACCAGTT GCCTCAACAT CAGGTAATTA ATGGTTCTGT TAGTGGTGAA 
ACAACGGCGG GAGGATTGCG TAGACTCCCG AGTTTACTGG CCTCAAGCAA ACCTGATCTG 
ATTGTCATTG AACTAGGTGG TAACGACGGA CTGCGAGGTT TTCCGCCTAA TAAACTGAAA 
TCAAATCTTA CAAAAATCAT TACCCTATCG CAGCAACAAG GCGCCAAAGT GTTATTAACT 
GAGATTATGG TACCACCGAA TTACGGCCCT AGGTATGCCA AATCTTTTAC TCAGATTTAC 
CATCAACTGG CCGAACAATA TACAATTAAG TTGATCCCTT TTTTCATGCA AGATATTGCC 
ACCGACAAAG CACTTATGCA GCGCGATGGA ATTCATCCAA ATGAACAAGC TCAAGACACT 
ATTACGCTGT TAATGTTACC TTGGATCACA CAAGCTTTAT CCGAGTAA
 
Protein sequence
MLTSVFILIV MSVPTYAATI LILGDSLSAG YGMPEDQGWV QLLRNQLPQH QVINGSVSGE 
TTAGGLRRLP SLLASSKPDL IVIELGGNDG LRGFPPNKLK SNLTKIITLS QQQGAKVLLT 
EIMVPPNYGP RYAKSFTQIY HQLAEQYTIK LIPFFMQDIA TDKALMQRDG IHPNEQAQDT 
ITLLMLPWIT QALSE