| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2566 |
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| Symbol | |
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| ID | 4279473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3068857 |
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| End bp | 3071340 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135359 |
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| Product | hypothetical protein |
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| Protein accession | YP_751245 |
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| Protein GI | 114563732 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTGGC AAATTGCGTG GAGATTGTTT AAACGTGAAC TCGCTCAAGG GCAATTAATT
CTTATCGTGT TGGCTATTAC GTTAGCGGTG TTGTCCGTTA CCGGGCTAGC GCGGGTTAGT
GAGCGTTTAC AAGTGGCCAT TAATGGCGAA GCCTCTAACT TTATTGCCGC TGACCGTATT
ATTGACTCTC CGGTTGAACT TGATTCACAA GTCCTTACTG TTGCCGATGA GTTAGGCCTT
GCCCACGTCA CTAACATGCA ATTTAACTCG ATGGTGTATT CGGGCGATAA ATTTCAATTA
GTGACCGTTA AAGCAGTAGG TGAGGGCTAT CCGTTAAAAG GCGATATAGA GCTGAGTAAC
GGTGTCACTC GAGCATTACC AAGCAAGGGA CAAGCATGGT TTGAAAATCG CTTAGGTGGT
TTGCTTGGCT ACCCTAAAAG CATTGAATTG GGTAATAGTG AGTTATCGCT AACCGAAGAG
ATTAGTCGTT TACCGGATGC GGGGTTTAAT CCGTTTGCGT CTTCACCAGT ATTACTCATC
CGTTTAGATG ATGTGGCGGC GACGGGTATT ATTCAACCCG GTAGTCGGGT GACGTATTTA
TACCAATTTA CTGGTAATGC AGAGCAATTA ACCGCATTTG AACTGCAAGC TAAACCTTTG
CTCAATAACA GTCAACGTTG GGTCGATGTG CAATCGGGAG ATTCCCCGAT AGCTTCAGCT
GTGCAACGTG CGGAGCGTTT TTTACTGCTA GCCAGTTTAC TTGGGATTGC CTTGGCGTGC
GCTGCCATTG GTATTGCAGC ACAGCGTTAC TGCCAACGCC ATTATGATGT TGTGGCCATG
CTGAAAACCT TTGGCGCTTC AGGCAAGCAA ATTCGGGTGT TATTCGGACT GCATTTGTCG
TTAGTGACCT TGTTGGGTAT TGTACTGGGG TTACTGGGCG GGTTATTGCT CGACATTGGC
ATTACGGCAT TTTTACCACC AGAAATAGCA GCTTATTCTC CACCGTATTT ACGCCCTGTT
TTATTAGGTG TAAGCACGGG ACTGATCAGT GCATTTATGT TTTCTGCTTA TCCGTTAATG
CGGCTGTTAG CCATTCCGCC ATTAAGAGTA TTGCAGCGCC AATTAGAAGG CTTGCAGCTG
GGCATGTGGC TCCATTTACT ATTAAGCTTG GCCGCAATGG CCTTGTTGGG GTATTTGTAT
TCAAGAAGTT TAGCATTGAC GATGACAGTG GTACTTGCAG TATTATTGTT AGGTTTTTTA
CTCAGTGTGC TGGGCTTTGT GATGATCCGT TTTGGTCATG GCATTGGCAT GAAAACCACC
AATCCTTTTC AATTAGCACT AGCCGGTCTG CGTCGTCGAG CTCGTCAAAA TGCTGTGCAA
TTGGTTGGAT TTAGCAGTGC ATTGGTATTA TTGCTAACCA TCTTGGCTTT GCGTCAAGAT
TTACTCAATG AATGGCAAAA GCAGTTACCA GAAAATGCAC CTAACTACTT TCTAGTTAAT
ATTGCCCCTG AGGATGCTAA GCCGTTAAAC GACTTTTTAA GCCTAAATCA TATTAACGCG
ACTGATATTT ATCCTGTGGT GCGCGGTCGA CTCACTCATA TAAATGACGA AGAATTGATT
TCAGGTAAAC AAGCTGAAAA CGGTGCTGAA GGGCGAGTGG GGATTTCTCG CGAACTAAAC
TTGACCTATC GAGATACTTT ACCGCCAAAT AATAAGTTGC TTGAGGGCAA GTTTAATCAA
GCTGCTGATG ATGTTTCGGT TGAGTCCGGT GTCGCTGATA GGCTAGGAAT TATACTTGGC
GACAAGCTCA CTTATAGCAT CGATAATCAA TCATTTTCGG TGAAGGTTGC CAGTATTAGA
CAGGTCCAGT GGGAAACCCT ACAACCTAAC TTTTACATGA TATTCACCCC TGAAGCGTTG
GCGCCATTTG CCTATACTTC GATGGCCAGT TTTCACCTTA ATGATGCGCA ATTAGCGGCG
GATGGTAGCT TACTGAGCGC CAATCAAGTG GTATTACAAC TAATCCAACA ATTTCCAACA
ATATCGATTA TTGATGTTGG GGCGATGGTT GAGCAGTTGC GACAAATTAT CGATCAAGTG
TCGTTGTCAT TGTCATTGGT GTTGGCATTA GTGTTGTTGG CCAGTGCTTT GGTGTTGATT
GCGCAAACGG AAGCTGGCAT GGCGACTCGA CAACGAGAAC TCGCGGTGTT GCGAACTTTT
GGCGCATCGG GTTGGTTACT TCGTGCTTCT ACTGGAATTG AGTTTGCTTT GCTTGGTGCA
ATTGCCGGTT TATTAGCGGT GATTGTGGCA GAATTTGCTT TATACATGTT AAAAACTCAA
GTGTTTGAGC TGGTTGTATA TATGCATTGG CCGTGGTGGG CGATTACTCC AGTCGCAGGG
GCGGTAATTG TGGCTATTTT AGGTGTTTGG CGTTGTCGAC AGTTATTGAA TATGTCTTGC
AGTGAGATGC TAAAAGCGGG TTAA
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| Protein sequence | MEWQIAWRLF KRELAQGQLI LIVLAITLAV LSVTGLARVS ERLQVAINGE ASNFIAADRI
IDSPVELDSQ VLTVADELGL AHVTNMQFNS MVYSGDKFQL VTVKAVGEGY PLKGDIELSN
GVTRALPSKG QAWFENRLGG LLGYPKSIEL GNSELSLTEE ISRLPDAGFN PFASSPVLLI
RLDDVAATGI IQPGSRVTYL YQFTGNAEQL TAFELQAKPL LNNSQRWVDV QSGDSPIASA
VQRAERFLLL ASLLGIALAC AAIGIAAQRY CQRHYDVVAM LKTFGASGKQ IRVLFGLHLS
LVTLLGIVLG LLGGLLLDIG ITAFLPPEIA AYSPPYLRPV LLGVSTGLIS AFMFSAYPLM
RLLAIPPLRV LQRQLEGLQL GMWLHLLLSL AAMALLGYLY SRSLALTMTV VLAVLLLGFL
LSVLGFVMIR FGHGIGMKTT NPFQLALAGL RRRARQNAVQ LVGFSSALVL LLTILALRQD
LLNEWQKQLP ENAPNYFLVN IAPEDAKPLN DFLSLNHINA TDIYPVVRGR LTHINDEELI
SGKQAENGAE GRVGISRELN LTYRDTLPPN NKLLEGKFNQ AADDVSVESG VADRLGIILG
DKLTYSIDNQ SFSVKVASIR QVQWETLQPN FYMIFTPEAL APFAYTSMAS FHLNDAQLAA
DGSLLSANQV VLQLIQQFPT ISIIDVGAMV EQLRQIIDQV SLSLSLVLAL VLLASALVLI
AQTEAGMATR QRELAVLRTF GASGWLLRAS TGIEFALLGA IAGLLAVIVA EFALYMLKTQ
VFELVVYMHW PWWAITPVAG AVIVAILGVW RCRQLLNMSC SEMLKAG
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