| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2549 |
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| Symbol | |
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| ID | 4279457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3052685 |
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| End bp | 3054787 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135343 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_751229 |
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| Protein GI | 114563716 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.133657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTC AACACATCTT TGCACTTTCA TCATTAGTTT TGGCTATGGG CTTTCTAGTA
CAGCCCTTCG CCCTTGCAGC CGAACAACAA AATGCTGACA ACAATGATCA AAATATCGAA
AAAATCCAAA TCTTGGGTGT TCGTTATAAA CGCGTTAGCC AAGGCGCGAC CGGGTTAACC
ATGGAGATTG ATGAAACTCC TCAGTCAATC AGTGTGGTGA CCAACGAACA GATAACTAAT
TTTGGGGCCA ATAACCTTAA TGACGTACTT CGTCTTGCGA CGGGTATTAA TGTTGAAGAA
TGGGAAACTA ACCGCACACA ATATACTTCT CGCGGTTTTG AAATTAAAAG TACCCAAATT
GATGGCGTCG GTTTACCTAA TGACTGGGGT ATCGTCACTG GTGCAATGGA AGCTTATGGT
TATGAAAAAA TTGAAGTTAT TCGTGGTGCT AACGGGCTAC TTACCGGAAT AGGTAATTCT
GCTGGTACCA TTAATTATGT CCGTAAACGC CCAACGAATG AAAATGAAGG CGAAGTAGGC
GTTTCCTACG GTTCGGATGA CTTTAAGCGC GTACAAGCTG ACTACTCTGC CCTGTTAACA
GAAAGCGGTA GTTGGGCTGG TAGAGTTGTT GCGGTGGTAG AAGACAAAGG GTCATACCTA
GATGGCCTAG AAAACGATCG TGGCTATATT TACGCTGTTG TTGATGGCCA ATTAACAGAC
AATTCAACGT TAACGTTAGG GTTTTCATAC CAAGATGCCA ACACAGACGG CAATACCTGG
GGGGGATTAG TATTTAACTA TACTGACGGC ACCCAAGCTG AGTGGGATAC CAGTGCGACC
ACAACACAAG AGTGGACCAT GTGGGACACT AGCAACACAA CCGCATTTGT TGAGTATACT
TACATTCTGC CTAACGATTG GGATCTTAAG GTTGCCTATA ACCATCAAGG TTTAGAAGAT
GAAAGTAAGT TATTTTATGC TTCTGGAACC ATTGATAAGG ACACAGGCTT AGGATTAAAT
GGTTGGCCTG GTCGCTATGA CACTGAATTT TCAGCCGATA TTGTAGACAT CACCACAATT
GGTCATTACA GCTTATTTGG TCAAGATCAT GAGCTCACCT TGGGATTAAG CGGTTCTCAA
AGTAAAAAAT ACATGTACCA ACACCCATTT GATTTTGCAG CCACTCCTGC ATATGGCCCA
ACGCCAGCCT TCCCTTACGA TCTCAATGCG ATCCCTGAAC CGGAATGGGG CGATAAAGTA
GAGTACTCTG ATATAGATGT AAGCTTACTT CGCGCTTATG GTTCAACTAA GTTCAATATC
AATGACAGCC TATTCGTGGT TGCTGGTTTT AATGCGATTA AATATACCCG CGAAGGTATT
AATAGCGGCG TTGATATAGA CAATGACGAG AGCGAGTTTA GCCCTTATGC AGGTGTGGTT
TATAGCATCA CAGAGGATAT AAACACCTAT TTCAGTTATT CAGATATTTA CCAACCGCAA
GAGCAGTATG ATTACGATGG GTATTTTTTA GACCCAACTA AAGGCGTAAA TTACGAGCTT
GGGCTTAAAA CCCTATGGCT TGATAATGAT TTAATGGCTA CCTTTGCACT ATTTAGCGCT
GAGCAAAATA ACCTCGCTAG CTACGCCGGC CTTAATGCCA ACGGAAATTA TTATTATAAA
GGTGTCAATG TCGAATCGAA AGGGTTTGAA GTTGAAGTCA CTGGATATAT AACAGACAAC
CTCAATGCAG TATTAGCTTA TACGCTGCTT GATGTAGAAG ATGACAACGG CGCTGAAGCA
AATGAGTGGG CAGCCCGCAA CGTTGTTAAC TTTTCAATGG ATTATACCAT TCCACAATTG
CCAGAAGTAA GCGTTGGATT CGGCGGCAGA TGGCAATCAG AAACCAAAAA CGTTGATTCT
AATGTAGAGC AAGATGCCTA TTTAGTGGTT AACGCTTTTG CCAGTTGGGA TGTGTCTGAG
GACCTCAATT TAAGAGCTAA CATTAATAAC CTCACCGATG AAAAATACAT TAATAGCTTG
GCGACCATAG GTTATTACGG CGCGCCTGTG AATGGTTCGG TGAACTTAAC TTATCGCTTC
TAG
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| Protein sequence | MKPQHIFALS SLVLAMGFLV QPFALAAEQQ NADNNDQNIE KIQILGVRYK RVSQGATGLT
MEIDETPQSI SVVTNEQITN FGANNLNDVL RLATGINVEE WETNRTQYTS RGFEIKSTQI
DGVGLPNDWG IVTGAMEAYG YEKIEVIRGA NGLLTGIGNS AGTINYVRKR PTNENEGEVG
VSYGSDDFKR VQADYSALLT ESGSWAGRVV AVVEDKGSYL DGLENDRGYI YAVVDGQLTD
NSTLTLGFSY QDANTDGNTW GGLVFNYTDG TQAEWDTSAT TTQEWTMWDT SNTTAFVEYT
YILPNDWDLK VAYNHQGLED ESKLFYASGT IDKDTGLGLN GWPGRYDTEF SADIVDITTI
GHYSLFGQDH ELTLGLSGSQ SKKYMYQHPF DFAATPAYGP TPAFPYDLNA IPEPEWGDKV
EYSDIDVSLL RAYGSTKFNI NDSLFVVAGF NAIKYTREGI NSGVDIDNDE SEFSPYAGVV
YSITEDINTY FSYSDIYQPQ EQYDYDGYFL DPTKGVNYEL GLKTLWLDND LMATFALFSA
EQNNLASYAG LNANGNYYYK GVNVESKGFE VEVTGYITDN LNAVLAYTLL DVEDDNGAEA
NEWAARNVVN FSMDYTIPQL PEVSVGFGGR WQSETKNVDS NVEQDAYLVV NAFASWDVSE
DLNLRANINN LTDEKYINSL ATIGYYGAPV NGSVNLTYRF
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