Gene Sfri_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2545 
Symbol 
ID4279453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3049763 
End bp3050212 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content41% 
IMG OID638135339 
Productexcinuclease ATPase subunit 
Protein accessionYP_751225 
Protein GI114563712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.378933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA ATGGTACGAA AAACAAAATC ATCGCGTTAT CTCTTGCACT CGCTATTGCC 
CCTTCTATCT CTTATGCCCG CGACGATGTC GGCAGTTATT CGGTAGCAGA TGCGCTGAGT
ACAGAACACG CAAAAAATAA ACTTGGCAGC AATGTTGCGT TTTATTTTGG TGATCAGGCT
TATTCAGAGC CAGTAAAAAT TATCGGTGAA TTCAGTGCTA ACAAAAAGAC CAATGCCTTT
AACAAATCTG ATATCGAAGC TTGCCATTGG GTGTTTTTAT CGGCAATGAT CGCGCTAAAA
GAGCGAGCGG TTAAAGAAGG CGGTAATGCT GTCGTTGAAA TCAAATCAAA TTATAAAAAC
AATCTTACTA GTAGCAATGA CACTTTCCAG TGCGGTGCTG GCAATATTGT TGCAGGCGTT
GCACTAACCG GTAAAGTGGT TACGTTGTAA
 
Protein sequence
MKNNGTKNKI IALSLALAIA PSISYARDDV GSYSVADALS TEHAKNKLGS NVAFYFGDQA 
YSEPVKIIGE FSANKKTNAF NKSDIEACHW VFLSAMIALK ERAVKEGGNA VVEIKSNYKN
NLTSSNDTFQ CGAGNIVAGV ALTGKVVTL