Gene Sfri_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2544 
Symbol 
ID4279452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3048477 
End bp3049217 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content37% 
IMG OID638135338 
Producthypothetical protein 
Protein accessionYP_751224 
Protein GI114563711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.438759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA TGAAAACTCT ATTGTTACTA ACCGCTATTA CTTTCCCGTT ATTTGCTTCA 
GCAAGTGACA CTTGCCAATC AACTACGCTT ATGGCGACCT ATAACATTGA ACAAACGACT 
CGCGATGCAG CATCAAACAA ACAAAACCAA CTGGTACTAT TAAGAGCCCA AAATTCTGTA 
TTTCACATCA GCAATCAACA AGTAGCAACA CAATGGACAA CACTGCCACA TAATCACATG 
AAAAAAACCT CATACTTTAT TGATGACAAA CGCGCCATTG AATATGAAGC AACCAAGACG 
ATATCTAATC AAGCATGGCA ATATCATGCA CAATTATTGC ACCCATTATT TCAAAAACAA 
TCAACACTCA TTGAAACGAC TGGGCAAGGT TGCGATAAAC TAGAACATTA TCAACAACAA 
ACAAATACAA AAACGGTTGA TATATGGTGG TTTCCAGCAA AAAAACTAGT ACAACGCATT 
AGTACTGTAT TGTCAGATAA AGGTGAATCT GCAGATAAAG CCGTAAATTG GCAATTAACC 
GAAGTGACTT ACGACAACAA AATGATTCAA CAACAGTTAG ATACATTCTC TACGTACCAA 
TCTACCGACT TTGCTGATAT TGGCGATAAT GAATCTGACC CGTTTTTTAG AAAAATGATC 
AACTTAGGTT TTATTGAACA CAGCGCTTCA GGATTTTATG ACAGCGAAGG AAATTCATTA 
TCGTCGGCAC ATCAGCATTA A
 
Protein sequence
MKHMKTLLLL TAITFPLFAS ASDTCQSTTL MATYNIEQTT RDAASNKQNQ LVLLRAQNSV 
FHISNQQVAT QWTTLPHNHM KKTSYFIDDK RAIEYEATKT ISNQAWQYHA QLLHPLFQKQ 
STLIETTGQG CDKLEHYQQQ TNTKTVDIWW FPAKKLVQRI STVLSDKGES ADKAVNWQLT 
EVTYDNKMIQ QQLDTFSTYQ STDFADIGDN ESDPFFRKMI NLGFIEHSAS GFYDSEGNSL 
SSAHQH