Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2544 |
Symbol | |
ID | 4279452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3048477 |
End bp | 3049217 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638135338 |
Product | hypothetical protein |
Protein accession | YP_751224 |
Protein GI | 114563711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.438759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA TGAAAACTCT ATTGTTACTA ACCGCTATTA CTTTCCCGTT ATTTGCTTCA GCAAGTGACA CTTGCCAATC AACTACGCTT ATGGCGACCT ATAACATTGA ACAAACGACT CGCGATGCAG CATCAAACAA ACAAAACCAA CTGGTACTAT TAAGAGCCCA AAATTCTGTA TTTCACATCA GCAATCAACA AGTAGCAACA CAATGGACAA CACTGCCACA TAATCACATG AAAAAAACCT CATACTTTAT TGATGACAAA CGCGCCATTG AATATGAAGC AACCAAGACG ATATCTAATC AAGCATGGCA ATATCATGCA CAATTATTGC ACCCATTATT TCAAAAACAA TCAACACTCA TTGAAACGAC TGGGCAAGGT TGCGATAAAC TAGAACATTA TCAACAACAA ACAAATACAA AAACGGTTGA TATATGGTGG TTTCCAGCAA AAAAACTAGT ACAACGCATT AGTACTGTAT TGTCAGATAA AGGTGAATCT GCAGATAAAG CCGTAAATTG GCAATTAACC GAAGTGACTT ACGACAACAA AATGATTCAA CAACAGTTAG ATACATTCTC TACGTACCAA TCTACCGACT TTGCTGATAT TGGCGATAAT GAATCTGACC CGTTTTTTAG AAAAATGATC AACTTAGGTT TTATTGAACA CAGCGCTTCA GGATTTTATG ACAGCGAAGG AAATTCATTA TCGTCGGCAC ATCAGCATTA A
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Protein sequence | MKHMKTLLLL TAITFPLFAS ASDTCQSTTL MATYNIEQTT RDAASNKQNQ LVLLRAQNSV FHISNQQVAT QWTTLPHNHM KKTSYFIDDK RAIEYEATKT ISNQAWQYHA QLLHPLFQKQ STLIETTGQG CDKLEHYQQQ TNTKTVDIWW FPAKKLVQRI STVLSDKGES ADKAVNWQLT EVTYDNKMIQ QQLDTFSTYQ STDFADIGDN ESDPFFRKMI NLGFIEHSAS GFYDSEGNSL SSAHQH
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