| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2532 |
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| Symbol | |
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| ID | 4279441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3027274 |
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| End bp | 3029349 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135327 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_751213 |
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| Protein GI | 114563700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA ACTTTGATGC CATCATTAGC CGTAATACCT TGTTTTGGTT ATTAATCACC
AATGTCGCCA TCCTGAGCCC TTTGCATCAA CAAGCCACCT TATGGAGCAT TGGAATTTGT
GCCATTTGCT TTGTTTGGCG AGTGGGGATT TTTCTCGGCA AAGTAGCCGC TCCACCTAAA
CTATTGGTGA CCACTTTGGC CATTGGCGCC GCAACCACCC TCGCCTTAGT GTCGAGCCAA
ATAGGTTTGC TCAATGCATT GGTTAACTTA TTAATATTAG GTTACGCGTT AAAGTACATT
GAAATGCGCG AACTTAGAGA TGTTAAAGCC ATTGTGCTAG TCGGCTATTT CCTTATCGGC
CTAACCTTGC TTGATCAACA AAGCATGCTT AATACCCTGC ACTTATTGGC CGTAGCGGTG
CTCAATACCG GCGTGTTAAT CAGTGTTTAT CAAGACAAAT CAAACAAAGT CGCTAACCTC
AGTTTTAGTC TTAAAATAAT ATTACAAAGC CTACCGTTAG CCATATTACT GTTTGTGGTG
TTCCCACGTC TCGGGCCGCT ATGGTTAGTG CCTAATATGA AAACGGCCAA GACCGGTTTG
TCTGATGAAG TGTCATTTGG TGACATTAGT AAACTCACTC GTTCAGCAGA ATTAGCCTTT
AGAGTTGGTT TTGATAATCC AGATGGCAGC ACCCTAGGAC CTGCTAACCA GGATTTATAT
TGGCGTACCT TGGTGATGGA AAATTATGAC GGCAAAACCT GGCGTCAAGA TCCGAGTATT
CAACAAATTC AGCGACAGGC ATACTTTAAC AAGCCCATGC GCCAAGCCCC TAACAACGTT
GCTAATGCTA ATGCTAATGC TAATGCTAGC AGTAAAAAAA TCGACTATGT GGTCATTAGC
GAACCCAGTC ATCAAAAATG GTTATATGGG TTAGATGAAG CATTTAGCCA AGATGATCAA
GTGGTCGAGT TAGCCGATTA TCGCTTGTAC TCGTTAAGGC CTGTCGATCA GCGTATGAGC
TATAGAGTGA CCTCATATCC TGAGACTATC ATGGATCTCA AACTCGACTC ACATACTCAG
CAGCTAAACC TCGCGTTGCC AGCCAATAGC AATCCAAAAA CCCGAAAACT CGGTTTGCAG
TTCGCCAAAG ATTATCCAGA TCAACAAGCG CGCATTAATG CGATGATGAA TTACTTTGCT
GAACAAGCCT ATTACTACAC CTTGAGCCCG CCCCGTGTCG GCGAGCAGCA AATTGATGAT
TTTCTGTTTG AAAACCGTGC TGGATTTTGT GCTCATTACG CTTCTGCGCT AGTGTTTATG
GCACGCGCTA GCGGCATTCC AACCCGTATG GTAACGGGTT ATCAGGGCGG AGATTATAAT
GCTAAAGCGG GCTATTACAG TGTTTATCAA TACATGGCCC ATGCGTGGAC CGAAGTGTGG
TTTGAAGGCC AAGGCTGGCA GCGTTTTGAC CCTACCGCAA TGATTGCACC GCAGCGGGTA
TTAGATGGAT TTGACGCCAC CTTTGACAGC CAAAGTAGCT ACTTACAAGA CAGCCCTTTT
AGCACGCTGC ACATGAAACA ATACCCATGG TTAAATGAAT TACGCCAGCA GTTTGCCAGT
GTCGATTACT ACTGGAGTGT GTGGGTATTA GGTTTTGACG AACAACGTAA ACAGCAAGTA
TTAGCAAAGT TATTGGGGGA TGTTAGCAGC ACTAAAATCG CTTTACTGAT GATTGTTAGC
TTTATCATTA TCGCACTGGT TATTGCCTAT TACGCTGGGT TGTTCAATGT TGATCGCCAC
CAAGATCCGC TTAATAAACG TTATCAACTC ATTTGCCAAC GTTTAGCGAA AAAAGGCATC
GCCCGTCAAC AAGGTCAAGC TGCGTCTGAT TACGCCGCAG CGGTTAACGC ACATTTAAGC
GCCCTAACCC CTCAAGTGGC AGCGGACTTT ACAGCCCTAA GCGATGCCTA TGTAGCACTT
AAATATCAAC CGCTTTCGGA ATCACAAACC CAGCAACAGC AACAACGCTT TAGGCAGTTA
TATCGCAGAT TGCGTTTGCG ACTGCTACGC AATTAA
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| Protein sequence | MTDNFDAIIS RNTLFWLLIT NVAILSPLHQ QATLWSIGIC AICFVWRVGI FLGKVAAPPK
LLVTTLAIGA ATTLALVSSQ IGLLNALVNL LILGYALKYI EMRELRDVKA IVLVGYFLIG
LTLLDQQSML NTLHLLAVAV LNTGVLISVY QDKSNKVANL SFSLKIILQS LPLAILLFVV
FPRLGPLWLV PNMKTAKTGL SDEVSFGDIS KLTRSAELAF RVGFDNPDGS TLGPANQDLY
WRTLVMENYD GKTWRQDPSI QQIQRQAYFN KPMRQAPNNV ANANANANAS SKKIDYVVIS
EPSHQKWLYG LDEAFSQDDQ VVELADYRLY SLRPVDQRMS YRVTSYPETI MDLKLDSHTQ
QLNLALPANS NPKTRKLGLQ FAKDYPDQQA RINAMMNYFA EQAYYYTLSP PRVGEQQIDD
FLFENRAGFC AHYASALVFM ARASGIPTRM VTGYQGGDYN AKAGYYSVYQ YMAHAWTEVW
FEGQGWQRFD PTAMIAPQRV LDGFDATFDS QSSYLQDSPF STLHMKQYPW LNELRQQFAS
VDYYWSVWVL GFDEQRKQQV LAKLLGDVSS TKIALLMIVS FIIIALVIAY YAGLFNVDRH
QDPLNKRYQL ICQRLAKKGI ARQQGQAASD YAAAVNAHLS ALTPQVAADF TALSDAYVAL
KYQPLSESQT QQQQQRFRQL YRRLRLRLLR N
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