Gene Sfri_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2532 
Symbol 
ID4279441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3027274 
End bp3029349 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content45% 
IMG OID638135327 
Producttransglutaminase domain-containing protein 
Protein accessionYP_751213 
Protein GI114563700 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA ACTTTGATGC CATCATTAGC CGTAATACCT TGTTTTGGTT ATTAATCACC 
AATGTCGCCA TCCTGAGCCC TTTGCATCAA CAAGCCACCT TATGGAGCAT TGGAATTTGT
GCCATTTGCT TTGTTTGGCG AGTGGGGATT TTTCTCGGCA AAGTAGCCGC TCCACCTAAA
CTATTGGTGA CCACTTTGGC CATTGGCGCC GCAACCACCC TCGCCTTAGT GTCGAGCCAA
ATAGGTTTGC TCAATGCATT GGTTAACTTA TTAATATTAG GTTACGCGTT AAAGTACATT
GAAATGCGCG AACTTAGAGA TGTTAAAGCC ATTGTGCTAG TCGGCTATTT CCTTATCGGC
CTAACCTTGC TTGATCAACA AAGCATGCTT AATACCCTGC ACTTATTGGC CGTAGCGGTG
CTCAATACCG GCGTGTTAAT CAGTGTTTAT CAAGACAAAT CAAACAAAGT CGCTAACCTC
AGTTTTAGTC TTAAAATAAT ATTACAAAGC CTACCGTTAG CCATATTACT GTTTGTGGTG
TTCCCACGTC TCGGGCCGCT ATGGTTAGTG CCTAATATGA AAACGGCCAA GACCGGTTTG
TCTGATGAAG TGTCATTTGG TGACATTAGT AAACTCACTC GTTCAGCAGA ATTAGCCTTT
AGAGTTGGTT TTGATAATCC AGATGGCAGC ACCCTAGGAC CTGCTAACCA GGATTTATAT
TGGCGTACCT TGGTGATGGA AAATTATGAC GGCAAAACCT GGCGTCAAGA TCCGAGTATT
CAACAAATTC AGCGACAGGC ATACTTTAAC AAGCCCATGC GCCAAGCCCC TAACAACGTT
GCTAATGCTA ATGCTAATGC TAATGCTAGC AGTAAAAAAA TCGACTATGT GGTCATTAGC
GAACCCAGTC ATCAAAAATG GTTATATGGG TTAGATGAAG CATTTAGCCA AGATGATCAA
GTGGTCGAGT TAGCCGATTA TCGCTTGTAC TCGTTAAGGC CTGTCGATCA GCGTATGAGC
TATAGAGTGA CCTCATATCC TGAGACTATC ATGGATCTCA AACTCGACTC ACATACTCAG
CAGCTAAACC TCGCGTTGCC AGCCAATAGC AATCCAAAAA CCCGAAAACT CGGTTTGCAG
TTCGCCAAAG ATTATCCAGA TCAACAAGCG CGCATTAATG CGATGATGAA TTACTTTGCT
GAACAAGCCT ATTACTACAC CTTGAGCCCG CCCCGTGTCG GCGAGCAGCA AATTGATGAT
TTTCTGTTTG AAAACCGTGC TGGATTTTGT GCTCATTACG CTTCTGCGCT AGTGTTTATG
GCACGCGCTA GCGGCATTCC AACCCGTATG GTAACGGGTT ATCAGGGCGG AGATTATAAT
GCTAAAGCGG GCTATTACAG TGTTTATCAA TACATGGCCC ATGCGTGGAC CGAAGTGTGG
TTTGAAGGCC AAGGCTGGCA GCGTTTTGAC CCTACCGCAA TGATTGCACC GCAGCGGGTA
TTAGATGGAT TTGACGCCAC CTTTGACAGC CAAAGTAGCT ACTTACAAGA CAGCCCTTTT
AGCACGCTGC ACATGAAACA ATACCCATGG TTAAATGAAT TACGCCAGCA GTTTGCCAGT
GTCGATTACT ACTGGAGTGT GTGGGTATTA GGTTTTGACG AACAACGTAA ACAGCAAGTA
TTAGCAAAGT TATTGGGGGA TGTTAGCAGC ACTAAAATCG CTTTACTGAT GATTGTTAGC
TTTATCATTA TCGCACTGGT TATTGCCTAT TACGCTGGGT TGTTCAATGT TGATCGCCAC
CAAGATCCGC TTAATAAACG TTATCAACTC ATTTGCCAAC GTTTAGCGAA AAAAGGCATC
GCCCGTCAAC AAGGTCAAGC TGCGTCTGAT TACGCCGCAG CGGTTAACGC ACATTTAAGC
GCCCTAACCC CTCAAGTGGC AGCGGACTTT ACAGCCCTAA GCGATGCCTA TGTAGCACTT
AAATATCAAC CGCTTTCGGA ATCACAAACC CAGCAACAGC AACAACGCTT TAGGCAGTTA
TATCGCAGAT TGCGTTTGCG ACTGCTACGC AATTAA
 
Protein sequence
MTDNFDAIIS RNTLFWLLIT NVAILSPLHQ QATLWSIGIC AICFVWRVGI FLGKVAAPPK 
LLVTTLAIGA ATTLALVSSQ IGLLNALVNL LILGYALKYI EMRELRDVKA IVLVGYFLIG
LTLLDQQSML NTLHLLAVAV LNTGVLISVY QDKSNKVANL SFSLKIILQS LPLAILLFVV
FPRLGPLWLV PNMKTAKTGL SDEVSFGDIS KLTRSAELAF RVGFDNPDGS TLGPANQDLY
WRTLVMENYD GKTWRQDPSI QQIQRQAYFN KPMRQAPNNV ANANANANAS SKKIDYVVIS
EPSHQKWLYG LDEAFSQDDQ VVELADYRLY SLRPVDQRMS YRVTSYPETI MDLKLDSHTQ
QLNLALPANS NPKTRKLGLQ FAKDYPDQQA RINAMMNYFA EQAYYYTLSP PRVGEQQIDD
FLFENRAGFC AHYASALVFM ARASGIPTRM VTGYQGGDYN AKAGYYSVYQ YMAHAWTEVW
FEGQGWQRFD PTAMIAPQRV LDGFDATFDS QSSYLQDSPF STLHMKQYPW LNELRQQFAS
VDYYWSVWVL GFDEQRKQQV LAKLLGDVSS TKIALLMIVS FIIIALVIAY YAGLFNVDRH
QDPLNKRYQL ICQRLAKKGI ARQQGQAASD YAAAVNAHLS ALTPQVAADF TALSDAYVAL
KYQPLSESQT QQQQQRFRQL YRRLRLRLLR N