Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2518 |
Symbol | |
ID | 4279427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3014421 |
End bp | 3014828 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638135313 |
Product | transcriptional regulator, MarR family protein |
Protein accession | YP_751199 |
Protein GI | 114563686 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.319242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCTT TGAATAATTT AATCATTGAG TTTTACGACA AACTGTCTTC TTGGGAGCAG TCTGTCGTTA AAGATACCGG TTATTCACTG GCACAAGTGC ACACCATTGA GGTGTTAGGC TCTCACGGTT CCATGAGAAT GAAAGAGCTA GCAGATAGGC TTGCAATTAC CACCGGCACT TTAACTGTTC AGGTAGAGAA ACTGGTAAAT TTTGGACTCA TTACTCGCTC TCCACATGAA GACGATAGAC GTTCAATATT AGTTGGATTA ACAAGCGAAG GCATTGCGCT CCATAAGCAC CACAATCGCA TGCATATACA ACTGACAGAA GATATTACTC GTCATTTAGA TCAAAATTCG ATAGATGTTC TGACCAAGAG TTTTGAAAAA ATGAACCGAG AATTCTAA
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Protein sequence | MHSLNNLIIE FYDKLSSWEQ SVVKDTGYSL AQVHTIEVLG SHGSMRMKEL ADRLAITTGT LTVQVEKLVN FGLITRSPHE DDRRSILVGL TSEGIALHKH HNRMHIQLTE DITRHLDQNS IDVLTKSFEK MNREF
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