Gene Sfri_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2518 
Symbol 
ID4279427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3014421 
End bp3014828 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content40% 
IMG OID638135313 
Producttranscriptional regulator, MarR family protein 
Protein accessionYP_751199 
Protein GI114563686 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.319242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCTT TGAATAATTT AATCATTGAG TTTTACGACA AACTGTCTTC TTGGGAGCAG 
TCTGTCGTTA AAGATACCGG TTATTCACTG GCACAAGTGC ACACCATTGA GGTGTTAGGC
TCTCACGGTT CCATGAGAAT GAAAGAGCTA GCAGATAGGC TTGCAATTAC CACCGGCACT
TTAACTGTTC AGGTAGAGAA ACTGGTAAAT TTTGGACTCA TTACTCGCTC TCCACATGAA
GACGATAGAC GTTCAATATT AGTTGGATTA ACAAGCGAAG GCATTGCGCT CCATAAGCAC
CACAATCGCA TGCATATACA ACTGACAGAA GATATTACTC GTCATTTAGA TCAAAATTCG
ATAGATGTTC TGACCAAGAG TTTTGAAAAA ATGAACCGAG AATTCTAA
 
Protein sequence
MHSLNNLIIE FYDKLSSWEQ SVVKDTGYSL AQVHTIEVLG SHGSMRMKEL ADRLAITTGT 
LTVQVEKLVN FGLITRSPHE DDRRSILVGL TSEGIALHKH HNRMHIQLTE DITRHLDQNS
IDVLTKSFEK MNREF