| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2517 |
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| Symbol | |
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| ID | 4279426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3013249 |
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| End bp | 3014412 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135312 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_751198 |
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| Protein GI | 114563685 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.262469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TTGCCGAAAA ATATATTCAC CAACACAATT TCACCTCCGT TAACGAGCAA
AATGTCAAAC GCACTTGGTA TGTGCTTGTT ATCACAGTCA TCACCATGGC CGTCGAAGTG
ATTGCGGGTA CGATATATGG TTCTATGGCC TTGCTCGCTG ATGGCTGGCA TATGGGGACT
CATGCCGCCG CTTTTTGTAT TACGCTATTC ACTTATAGTT ATGCAAAAAA GCATGCTAAT
AGTGACAAAT TCTCTTTTGG CGTAGGCAAA GTCGGCGTTC TCGGTGGATA TACAAGTGCA
ATCGCATTAG CCATTGTCGC TATCATTATG CTGGTCGAAT CTCTACACCG TTTATGGTCA
CCTATTGAGA TCCAATTTAA CCAATCTATT CTTGTGGCTA TCATAGGTCT AGTCGTTAAC
ATCGCCAGTA TGTTTATATT GGGCCATGAA CATCACGGCC ATGATCACGG TGACCACAAG
CATCATAGCC ATAAGCATGA TGACCACAAA CACCATAGCC ACGAGCATGA TGACCACAAA
CACCATAGCC ATGAACATGA TGACCACGAG CATCATAGCC ATGAGCATGA TGACCACGAG
CGTCATAGCC ACGAGCATGA TGACCACGAG CGTCATAGCC ACGAGCATGA TGGCCACAAA
CACCATAGCC ACGAGCATGA TGACCACAAA CTTCATAGCC ATGAACATGA TGACCACGAT
CATCATAGCC ACGAGCACCA TAGTGGTAAC GACCACAATC TGAAGGCAGC TTACTTCCAC
GTACTCGCTG ACGCATTAAC ATCGGTGTTA GCAATTTGTG CACTTTTGGT AGGAAAATTC
CTTGGATGGT ATTGGTTAGA TCCCATCATG GGAGTCGTTG GTGCGGTGGT AATTACTAAA
TGGGCTTTAG GTTTAATGAA GCAAACTAGC CCTATTCTAT TAGATGAAAA TATCGACGAA
GATTACCAAT TAGACATTGT TAACACCATT GATGATGAAC AAACCAAGGT CACCGATATT
CATATTTGGA GAATTAGTGC AGATCATTAT TCCGCGTCTA TCGCTATCTG CACAACAACT
GACGCCAGCG TAGAATCATT TAAACACTCA TTGAATAAGT TTGATAAGCT AAGCCACTTA
ACTATCGAAG TGAATTACTG CTGA
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| Protein sequence | MNKIAEKYIH QHNFTSVNEQ NVKRTWYVLV ITVITMAVEV IAGTIYGSMA LLADGWHMGT
HAAAFCITLF TYSYAKKHAN SDKFSFGVGK VGVLGGYTSA IALAIVAIIM LVESLHRLWS
PIEIQFNQSI LVAIIGLVVN IASMFILGHE HHGHDHGDHK HHSHKHDDHK HHSHEHDDHK
HHSHEHDDHE HHSHEHDDHE RHSHEHDDHE RHSHEHDGHK HHSHEHDDHK LHSHEHDDHD
HHSHEHHSGN DHNLKAAYFH VLADALTSVL AICALLVGKF LGWYWLDPIM GVVGAVVITK
WALGLMKQTS PILLDENIDE DYQLDIVNTI DDEQTKVTDI HIWRISADHY SASIAICTTT
DASVESFKHS LNKFDKLSHL TIEVNYC
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