| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2506 |
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| Symbol | |
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| ID | 4279416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3001314 |
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| End bp | 3002519 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135302 |
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| Product | major facilitator transporter |
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| Protein accession | YP_751188 |
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| Protein GI | 114563675 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCGG CTGCTGCATT ACCAAGCCAA CTGAACACCA CCGCCATTTT GTTAGTGTTA
GCCTTAGGCA CATTTATATT GGGATTATCA GAGTTTTCGA TGATGCCAAT GCTGCCATTA
ATTAGTGAAA CATTTTCCTC AACACCGTCA CAAAGTGGTT ATGCGATTAG TGCTTACGCG
ATAGGCGTTG TTGTCGGCGC CCCTATTTTA ATGCTGACCA CAGCCAACAT GAAAAAACGC
CATGCCTTGG CAATATTTCT GACATTAATG TTTATCTCTA ATGGCTTAAG TGCGATGGCA
ACCTCACTTG AACAGCTTAT TGTATTTCGC TTTTTAAGTG GCCTACCCCA TGGCGCTTAT
TTTGGTGCCG CTATTTTATT GGCTGCCGAT ATTGCCCCTC AAAATAAACG TGCAAGTTAC
ATGTCTAAAG TGTTTATGGG CCTAACCATA GCCACTATTG TAGGGGTTCC CATTGTCACT
TTAGTCGGCC AAAACTTAAG CTGGCGCTAT TGTTTAGCGG GTGCATCTGT CCTCGCCTTA
GTTGCATTAG TGTGCGTATA TGTGGTGATC CCTAAAATTG AAAACAACCA GCCGTCAAAT
TTAATCAATG AGTTTAGCGT GTTAAAGAAT AAATTGGTTT GGTCAATTCT TGGCATTGTG
ATTATTGGCT TTGGTGGCGT ATTTTGTATT TACACTTACA TCGCCGATAC CATTTTAGTG
GTGACTGAAA CGCCGGCATA CACCATTTCA ATCGCGATGG TAATGTTTGG TATTGGTTGT
ACTTTAGGCA ATTACGTATT AGGCAAAGCA GCCGATCGCG CAGCCTTAAA AACCACTGGT
ATTGCCTTAG TGTGTACGAT TATATTTTCG CTTGCTTACG TCAGTGCCAG CCATAATATT
TGGCTATTGT ATGCGGTAAT TTTCTTTATT GGCTGCAGTG TGGGTTTAGC GACACTGATT
CAAACCTTAC TGATGGACGT ATCGCCAAAT GGTCACGCGA TGATAGGGGC ATTAGTACAA
TGTTCATTTA ACACCGCCAA TGCTATCGGC CCTTGGGTGG GCGGCATGTT TATCGCACAG
GGCGCAATGC CTAACGAGAC AGGCTATGTA GCGGCAGTGT TATTTGCTGG CGGCTTAATG
ATGTGGTTGT TAAGTTATCT GCAAATGAAT AAGAAAAAGG CTCAACTGGA ACAATGTTCT
GCATAA
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| Protein sequence | MTPAAALPSQ LNTTAILLVL ALGTFILGLS EFSMMPMLPL ISETFSSTPS QSGYAISAYA
IGVVVGAPIL MLTTANMKKR HALAIFLTLM FISNGLSAMA TSLEQLIVFR FLSGLPHGAY
FGAAILLAAD IAPQNKRASY MSKVFMGLTI ATIVGVPIVT LVGQNLSWRY CLAGASVLAL
VALVCVYVVI PKIENNQPSN LINEFSVLKN KLVWSILGIV IIGFGGVFCI YTYIADTILV
VTETPAYTIS IAMVMFGIGC TLGNYVLGKA ADRAALKTTG IALVCTIIFS LAYVSASHNI
WLLYAVIFFI GCSVGLATLI QTLLMDVSPN GHAMIGALVQ CSFNTANAIG PWVGGMFIAQ
GAMPNETGYV AAVLFAGGLM MWLLSYLQMN KKKAQLEQCS A
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