| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2503 |
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| Symbol | |
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| ID | 4279413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2994580 |
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| End bp | 2996286 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135299 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_751185 |
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| Protein GI | 114563672 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAAC AACATCAAGC ACAACTACCG CTTACCCAAA GTGAATATCA TGGTGTCACC
TCAACGACGC TTACTGATAA AACCATTGGT CAATATTTTG ATGATATTGC CAATGCTTAC
CCAGACAATC TTGCGGTAGT CGTTCATCAT CAACAAATCC GTTGGAATTA CCGTGAGTAT
CAAGCAAAGG TTGATGCGCT TGCCACTGGT TTGTTAGCGC TAGGTATTCA ACCAGGGGAT
CGAGTCGGAA TTTGGTCTCC TAACAATATT GAGTGGTGCT TAATCCAATT TGCTACGGCT
AAAATTGGCG CCATTATGGT GTGTATTAAT CCGGCTTATC GGCCTGAAGA GCTAGAATAC
TCCTTAAGTA ATGTGGGCTG CCGAGCAGTC ATTTGCGCAG ATAAATTTAA GTCCAGTGAT
TACTTACAGA TGTTAAATGA GTTACTGCCA GAGTTAAGCA CCAGCACAGC AGGTAAGCTC
ACCACACTCG CACTGCCTCA GCTTGAGTTT GTTATTCGAA TGGGCACCGA CCGTACTCCC
GGTATGCTCA ATTTTAATGA TTTGCTGCTG GAGGTTAACG ACGAAGCTCA ACATGTGTTG
GCCACCATTG CTGACTCTCT CGATACTCAT GATTCGATTA ATATTCAATT TACATCAGGT
ACCACAGGCA GCCCCAAAGG CGCGACGTTA TCGCATCATA ATATTTTAAA TAATGCTTAT
TTAGTCGCAG ATGCTATGGG CTTTACTCAA GCCGACAAGT TATGCATCCC TGTACCGCTA
TACCATTGTT TTGGCATGGT GTTAGGCAGT TTATCCAGTA TTATTCATGC ATCGGCGGCG
GTATATCCTG GTGAGTCCTT TGACCCACTC ACCACTTTAC AAGTGGTCGC ACAAGAGCGT
TGTACTGCTC TACATGGCGT ACCGACTATG TTTATTGCCG AGTTAGAACA TCCACAATTT
AACCAGTTTG ATCTTAGCTC ATTGCGCACA GGCATTATGG CGGGCGCCAC ATGCCCCGAA
GAAGTGATGC GCCGAGTGCA AGAGTTAATG TACATGAAAG AAGTACTAAT TGGTTACGGA
CAAACCGAGT GCAGCCCATT AAATCACATC ACTGAAATTG ACTCCCCAAT CGAAAAACAA
GTGCTCACCG TGGGTCGAGC ATTGCCGCAT ACTGAAGTGA AAATCATCAA TGAGTTTGGC
GACGTGGTTG CTATTGGTCA GCCCGGAGAA GTGTGCAGCC GAGGTTACTG CATCATGCAA
AGTTATTGGA ATGATGCAGT CAAAACAGCT GCAACCATCG ACAGCGCAGG CTGGTTACAT
TCGGGCGATA TTGGCCAAAT GGACGAGTTA GGCTACGTGC AAATTGTTGG CCGCATTAAA
GACATGATTA TTCGCGGCGG TGAAAATATA TATCCACGAG AAATAGAAGA AAAACTTTAT
AGCCACAAAG ACGTGCAAGA CGCGGCAGTA TTTGGAGTAC AGAGTGACAA ATACGGCGAG
GAGGTATGCG CATGGATTAA AGTCCGCGCC AATGCCGATA TCACCGAAGA CGATATTCGC
CACTTTTTAA CCGAAAAATT TGCCTATTTT AAAGTGCCGC GCTACATCAA GTTTGTTGAC
CAATACCCAA TGACAGTAAC GGGTAAAATT CAAAAATTTA AGATGCGTGA GTTGATGTAT
CAAGAGTTAC ATGAAGCCAT AAACTGA
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| Protein sequence | MVKQHQAQLP LTQSEYHGVT STTLTDKTIG QYFDDIANAY PDNLAVVVHH QQIRWNYREY
QAKVDALATG LLALGIQPGD RVGIWSPNNI EWCLIQFATA KIGAIMVCIN PAYRPEELEY
SLSNVGCRAV ICADKFKSSD YLQMLNELLP ELSTSTAGKL TTLALPQLEF VIRMGTDRTP
GMLNFNDLLL EVNDEAQHVL ATIADSLDTH DSINIQFTSG TTGSPKGATL SHHNILNNAY
LVADAMGFTQ ADKLCIPVPL YHCFGMVLGS LSSIIHASAA VYPGESFDPL TTLQVVAQER
CTALHGVPTM FIAELEHPQF NQFDLSSLRT GIMAGATCPE EVMRRVQELM YMKEVLIGYG
QTECSPLNHI TEIDSPIEKQ VLTVGRALPH TEVKIINEFG DVVAIGQPGE VCSRGYCIMQ
SYWNDAVKTA ATIDSAGWLH SGDIGQMDEL GYVQIVGRIK DMIIRGGENI YPREIEEKLY
SHKDVQDAAV FGVQSDKYGE EVCAWIKVRA NADITEDDIR HFLTEKFAYF KVPRYIKFVD
QYPMTVTGKI QKFKMRELMY QELHEAIN
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