Gene Sfri_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2502 
Symbol 
ID4279412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2993350 
End bp2994207 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content44% 
IMG OID638135298 
Producthypothetical protein 
Protein accessionYP_751184 
Protein GI114563671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCTG CTATGGCGGC ATTTTCTATT GAAGACATGT TGATTAAATC GGCTGCCGAA 
ACAACTTCTA TTGGTCTGAT TTTAGCGTTA TTTGGATTAG GCGGAATGTT GATTTTTATG
CTGCTGACTT GGCGTAAAGG GCAAACAATT TTACACCCAG CACTGATGTC CAAGCCAATA
CTCATACGTG CAGTTTGCGA AGTCGTGGGT CGATTCTGTT TTGCATTGGC TATTACGCTA
ACGCCTTTAT CGAGTGCATC GGCCATTTTG CAAGCCACGC CATTAATCGC AATGATAGGT
GCAGCCTTAT TGTTTGGTGA ACAAGTGGGT TTTAAACGCT GGATTGCTGT ATTGGTTGGT
TTTTGTGGTG TGCTGATGAT CATTCGCCCC GGCCTTGATG GCTTTGAAGC AACATCTTTA
TTTGCCGTCG TGGCGACCTT AGGTTTTGCG GGCCGCGATT TAGCCACTCG CGCAGCTTCA
ACGGTGTTGT CTAATATGCA ACTTGGGGTA TATGGATTTT TTGTGTTAAT CCCAGCTGGC
ATTGCAATAC AGTTATACCA ACACGAGCCA TTACAACTTA GTTCTACCGC CGCAGTGCAA
ATTATCGGTG CAATTGTGTT TGGGGTGATG GCGTATAATG CCCTCACAAT TGCTATGCGT
GCTGGCGATG TATCGGTTAT TTCTCCTTTT CGTTATACGC GTTTATTATT TGCCTTAGGT
TTGGGGATAT TTATATTTGG AGAGTCACCA GATTTAGCGA CTCTTCTTGG AAGCCTGTTG
GTGGTATTAA GTGGCGGATA TACCTTAATT CAAACGCGTA AAACAGTCAC AGCAAGTTTG
ATAAAGAGTC GCGCATGA
 
Protein sequence
MVAAMAAFSI EDMLIKSAAE TTSIGLILAL FGLGGMLIFM LLTWRKGQTI LHPALMSKPI 
LIRAVCEVVG RFCFALAITL TPLSSASAIL QATPLIAMIG AALLFGEQVG FKRWIAVLVG
FCGVLMIIRP GLDGFEATSL FAVVATLGFA GRDLATRAAS TVLSNMQLGV YGFFVLIPAG
IAIQLYQHEP LQLSSTAAVQ IIGAIVFGVM AYNALTIAMR AGDVSVISPF RYTRLLFALG
LGIFIFGESP DLATLLGSLL VVLSGGYTLI QTRKTVTASL IKSRA