| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2501 |
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| Symbol | |
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| ID | 4279411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2992131 |
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| End bp | 2992889 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135297 |
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| Product | hypothetical protein |
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| Protein accession | YP_751183 |
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| Protein GI | 114563670 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATCA AAGGAACCTG CATTTCATCT ACAGCAGATG AGCACGGCCC CATTTATGTT
TATCAAACAA GAAACAGCCG CATTCTCAGC TTTGATGGAA AAATCTATCA AAGCTGCATG
AAAATCAATG ATATTAATGG ATTACATCTA GGTTACACCC AAGCCATGAT GGCCGGTTTA
TTTTTTATTC CCGCAGTAAC AACAGCCACA ATCATGGGGC TGGGTGCAGG TTCAATGGCT
AAAATATTAC TCAGTAGTTT CGTCGATTTG AAGGTGCACG CGGTTGAATA CCGTGAAGCA
GTCGCGAAGG CTGCGAAAGA GTTTTTTTAC TTACCAGAAA CTGAACGTCT TGCTATTCAT
ATAGACGATG CGGTGAATTA CATAAAAAAC ACCGACATTA AAAGCGATAT TATCTTTTCA
GATCTATACA ACTCACAAGG TATGGAGCCG AAACAAGTAC AATCATCCTA CTTACACGAT
TGTAAAAATG CACTCAATCA GCAAGGGGTT TTGGTGCTCA ATATCTGGCA TACGTCAGCT
GAATTACGCC AAGAGTTAGA TGAATTACTC GCGCTCGAAT TTGAAAATCG ATTACTCAGT
TTTGACGTCG AAAGCGGCAA TACAATCGTG CTTGCATTCA AAAACGATAT TCCTGCGATA
AAAAGACACG AGCTACTGGC GAAAGGCAAA GCGTTACAAG CGCAAATGAG TATTCCAATG
GAACGTTACG CCAACTTACT CTGCGATGCA CAAGCTTAA
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| Protein sequence | MDIKGTCISS TADEHGPIYV YQTRNSRILS FDGKIYQSCM KINDINGLHL GYTQAMMAGL
FFIPAVTTAT IMGLGAGSMA KILLSSFVDL KVHAVEYREA VAKAAKEFFY LPETERLAIH
IDDAVNYIKN TDIKSDIIFS DLYNSQGMEP KQVQSSYLHD CKNALNQQGV LVLNIWHTSA
ELRQELDELL ALEFENRLLS FDVESGNTIV LAFKNDIPAI KRHELLAKGK ALQAQMSIPM
ERYANLLCDA QA
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