Gene Sfri_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2490 
Symbol 
ID4279401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2976116 
End bp2977063 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content40% 
IMG OID638135286 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_751173 
Protein GI114563660 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.823404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTG CATACGCCTA TCAAAATAGA GAATTAATCA CCACCGAATT GAATGTGGGC 
GATAAAGTCC CTGAATCAAC CTTGTGGTTA GATTTATTAA AACCCGATGA TGCAGAGCGT 
CAATGGTTGA GGCTATTCTC TGCTGAAGAA GTTCCTGACG AAGAAGATAT TAAAGAAATT 
GAGGCTTCGG CGCGTTTTTA TCAAAACCAA GACGGGTTAC ACATTAACTC GTTGTTTCCT 
CAGCGTGTGA GTTCAGATGT ACGCGCAGTG AACGTGTCGT TTAATTTGCG AGAACGTTTT 
TTGCTAACAA TGCGTGAAGA AGATGTCGGC CTTATTCGTT TACTGCGTAA TTACCTACGT 
TTAGGGCGCT TGGATATTAC CACTCCACAA GGCTTGTTGT TAGAGCTCTT TACTTTGAAA 
GTTGATTATC TATCTGACTT AATTGAAGAT ATTTATAGTA TTTTAGAAAA TGTTGGCGAG 
CAAGTATTTA ATGACGAAGA GCTTGATGGC GTTTTTAAAC TGATTACCTT ACAAGAAGAT 
TCGAACGGTA AAATTCGATT AAGTCTATTG GATACTCAGC GTTCATTACG TTATATGCAA 
CGTTATTATC GTGACCGATT GTCGGATGAA AACTTGAAAG ATATTCGTGA GATGTTATCG 
GATATCGAAT CATTGATGCC ACACAGCCAG TTTATTTTCG ACAAGTTACA ATTTTTACTG 
GATGCGGCGA TGGGATTCAG TGGCTTGCAA CAAAACAAAA TCATTAAGAT ATTTTCGGTA 
TCGGCGGTAG TATTTTTACC CCCTACGCTA ATTGCCAGCA GTTATGGGAT GAACTTTCAT 
ATTATGCCAG AACTCGATTG GCGCTTTGGC TACCCAATGG CAGTGGCATT AATGCTAGCC 
AGTGCAGCAG GAACCTACTT TTTCTTTAAA CGGAAAGGTT GGTTATAG
 
Protein sequence
MITAYAYQNR ELITTELNVG DKVPESTLWL DLLKPDDAER QWLRLFSAEE VPDEEDIKEI 
EASARFYQNQ DGLHINSLFP QRVSSDVRAV NVSFNLRERF LLTMREEDVG LIRLLRNYLR 
LGRLDITTPQ GLLLELFTLK VDYLSDLIED IYSILENVGE QVFNDEELDG VFKLITLQED 
SNGKIRLSLL DTQRSLRYMQ RYYRDRLSDE NLKDIREMLS DIESLMPHSQ FIFDKLQFLL 
DAAMGFSGLQ QNKIIKIFSV SAVVFLPPTL IASSYGMNFH IMPELDWRFG YPMAVALMLA 
SAAGTYFFFK RKGWL