| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2487 |
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| Symbol | |
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| ID | 4279398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2972455 |
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| End bp | 2973807 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135283 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_751170 |
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| Protein GI | 114563657 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTAA TTTTACAACC TAAAAAACGC CTGCTTACAA GGATGTTCTT AACGTCCTTG
AGTATTATCG CGTTAGTGGG ATTTGGTCTG GCGTGGTTAA TTACCCTACT TCATGCCCAA
AACCGCTATA ACCAAACCAC CAGCGCTTTA ATCGCCCAAT TACCCATCAT TGCCGCAGAG
TTTCGCGAAA ACAATTTAAT CCCTATCACC CAAGCCCGTG AAGGTGATGA CGTCGACACG
CAATACATTA TGGCTACCTG CAATAGTAGC TATAACACCT TATGGCGATC TGACTACGCA
ATCAGCTTAA ACTTGAATAA CATCTGTGAA CAATATCTTG ATATAAAAGA TGATTTACCG
CCTTTCTACC TCAACTTTAA TGGCCAACAA AGCTACTTTG CTTACTTGCT CAGCATTGAC
GTTGAAACCG AAATGTATCA TTTATTGATT TTGAAAGATG CCACTGCACT GAAAGCTGAA
CTCAATCAAT TTAATCGACT TACTTATTTT AGATTGGCAA TGGTAATGGC TATTGCACTA
CTGCTTTTAG TGAGTGCAGC TTACTGGGGA ATGCGGCCGT TAACTCAGCT AAAACAAGAG
TTATTGCAGC TACAACAAGG ACGTAAAAAA AGCCTATCAC AAGATTACCC CGTCGAATTA
CAAGGCATCA CCACAGCGTT AAATCAACTT ATGGACCAAA CAGACCAACG TCAAACTCGC
TATCAAAATG CCATGAACGA CCTTGCTCAC AGCTTAAAAA CGCGTCTCGC CGCCAGTATT
GCCATCATTG ATGATGACTC ATTAGATCGT CAGCAACAGC ATCAAAAAAT ACTTGAACAA
ATAAACGACA TGGATCATTT AGTACAATAT CAACTTAAAC GCGCCATGTT AGGCCAACAA
GGTTTACGTC AGCAACAAAC TGTTATCGCG CCGATTGCGC AACAACTTGC GCAAATGCTC
GATAAAATCT ATCGAGACAA ACATGTCATA TTCACCCTAA ACATATCACC TTCATTGCAA
CTACCACTCA GCAAAGGCGA TGTTATGGAG CTATTGGGTA ATCTGCTGGA AAATGCATTT
CGCTTATGTG GCAATAACGT CATGATCAGC GCCGCTAGCC TCGATAACAA TCTCATCCAA
CTCAGTGTTG AAGATGACGG CCCGGGCGTA GACAACGCCA TTAAACAAAA TATAATCCAG
CGCGGTACGA GAGCCGACAC TCAATCATCT GGGCAAGGAA TTGGTCTAGC AGTATGCCAT
GAGCTCGTTA GCAGTTATGG CGGCACAATG ACTATTGGTA CTAGCGAGCT TGGCGGAGCA
GCTTTTGTCA TTCAGCTCCC CGCAACGGCA TAA
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| Protein sequence | MRLILQPKKR LLTRMFLTSL SIIALVGFGL AWLITLLHAQ NRYNQTTSAL IAQLPIIAAE
FRENNLIPIT QAREGDDVDT QYIMATCNSS YNTLWRSDYA ISLNLNNICE QYLDIKDDLP
PFYLNFNGQQ SYFAYLLSID VETEMYHLLI LKDATALKAE LNQFNRLTYF RLAMVMAIAL
LLLVSAAYWG MRPLTQLKQE LLQLQQGRKK SLSQDYPVEL QGITTALNQL MDQTDQRQTR
YQNAMNDLAH SLKTRLAASI AIIDDDSLDR QQQHQKILEQ INDMDHLVQY QLKRAMLGQQ
GLRQQQTVIA PIAQQLAQML DKIYRDKHVI FTLNISPSLQ LPLSKGDVME LLGNLLENAF
RLCGNNVMIS AASLDNNLIQ LSVEDDGPGV DNAIKQNIIQ RGTRADTQSS GQGIGLAVCH
ELVSSYGGTM TIGTSELGGA AFVIQLPATA
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