| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2480 |
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| Symbol | |
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| ID | 4279391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2963473 |
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| End bp | 2965935 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135276 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_751163 |
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| Protein GI | 114563650 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.311981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCAG CATATAAAGT TTATTTCGCG CTTTTATGTT CTTTTTTTCT CGTCGCATGT
GGCGGCGGTG GCAGTATAAC CGATGATGGA ACCGGAGGTG GGACTACACC AGACCCAACC
ATATCTATTT CATTAAGTAT CGACAACGAT CAAGTTTCTG TTGCTGAACC TGCAGTTATT
ACTGCAACAG TGAAAGACTC AACGGGTGCA GCTGTCAGCA CGCTTGTTTC ATTTACGCTT
AATAATGATG ATTACGGTAC ATTTTCACCA AGTACCGGTG AAGTTGTCAC CAATTCAAGC
GGTGTTGCTA CTATCCAACT CAATACCGCA GAAATTAATA CTGGAGCAAC AGTAACCGCG
ACTACCACGT CAGGTGAAAG TGCAGCATTA TTTGTCACTA TGACGGGTGA TGGCGGTGTT
GCAGGCGGTG GTGCTCAAGT GTCATTGGTA TTAACTGATG CAGCTGGAAA CGCTATTCAA
TCGATTAGCA CTTTATCACC AGGTAAATTA ACTGCAACAG TTACAGGTAT TACTAGGTCC
TCTATTGTTA CATTTGAAAG CCCTATCGGT GATTTACCCG TTAAAACTGC AGTAACTAAT
GCACAAGGTA AAGCTACCGT TGATATTTAT GCAGGTAGCT CGCTAGGTGC CGGTGAAGCA
ACAGCGACAT TATCAACCAA TGAAACCGGT TCAACTATTG TTGTTGTCGG AGCTACCAAC
GTTGTGATGG GCAGTGGTAC ACCATTTGTT GAAGGTGTCG CTGCTATTAG TGCTACTGAT
TTATCCGCGG GTGGAACAGC GACTGTAACC GTGTCGATTC AAGATGATTT AGGTAATGCT
TTTACACAAC CTGTGGACGT AAATTTTTCA TCTACTTGTG CTACTAAAAT TCCTGCGCAA
GCAGTGATAA GCTCACCAGT ATCGTCAAGT AATGGTGTCG CAACCTCAAC GTATCGTGCT
GAAGGTTGTG TGGGTGAAGA CCAAATTAAT GTGACTGCCA ATGCTGGTGG CATCAGTTTA
TCTGCAGTAG GTACCATCAA TATACTTCAG GCTGACGTTG GCAGTATTGT GTTTGTTTCA
GCAGTACCAG AGAACATCAG TATTTTAGGG ACTGGCGGCA CTGAGTCATC TGTAGTTAAA
TTTAAAGTTT TGGATAAAAA TGGCAATGTG GTAGCTAACC AAAATGTTAA ATTTGCACTA
AATACTACTG TAGGTGGGGT TAAAATTGAT CCCCTGCAAG CTACTACAGA TAATAGTGGT
ATTGTGCAAA CGGTAGTAAC CACAGGTACA GTAGCGACTT CTTTACGTGT GACTGCAACG
GTAGACAATG GTGCAATTCC GACAATATCG AGTCAGTCTA GCCAGCTAAT TGTGTCTACG
GGTATTCCAG ATCAAGATAG TTTCTCATTA GCTGCAACGA TATTAAATCC AGAAGGCTGG
AATGTTGACG GTACAGAAGT GACGGTTACT GCACGTATGG CTGATGCATT TAACAACCCT
GTACCCGATG GGACAACGGT ATCTTTTACC ACTGAGGGGG GGTCTATTGA AGATGCCTGT
CAAACACTTA ATGGTGCATG TTCTGTAGTG TGGACGAGTC AACTACCAAG ACCAGAAGGT
CAGATAATTC TGAATGGCGC CGGTCAGATG TATCGTAATC CTAATGCTGC ATTAGCTTAT
GATGCCACTT TAGATCTTTA TGGAAATATC TATGGCCAAA AATACGGTGG ACGTGCAACC
GTTACAGCCA CTGCAATTGG TGAAGAGTCT TTTCCAGATT TAAATGGTAA TGGTCGTTTT
GATGCATCAG AAGCAAATAC GTTTCTTACG GGGACAGATG TGACTGGTCA GTCATTTGAT
TTAAATGATG CATATAATGA CTATAATGAA GATGGCCTCT TTAATCCGCA ACAAACCGGT
GGTCAAGCTG GTGGCACATT AGAAGAGTTA ATCGATTTTA ACTCCAATGG TATATTTGAT
GTAAAAGACG GTAAATATAA TGGTGTGCTT TGTTCTGACC CTGTGCACAG TGCATGTGCT
GATGGCGTAA GTGATTCAAA GTCATTATTT GTTCGCAGAA GCTTAACATT AGTGATGTCT
GGAAGTACTG CGTATGCTAC TGCTCCCGCT GATATTGTAG TTGACGATAG CACTGGCATT
CATTCTGGTG CAAGCAGTAT GGTTATTGTG GGTAAAGGCT CTGCAACTGC AACATTTACG
ATTTCAGATT TGCATAATCA ACAAATGCCA GCAGGTTCGA TCGTAAGATT TACCACGTCA
GCGGGCTCGG TGGTGAGTTC AAGCGAATAT ACATGGCCAA GTACCAACTA CAATGGTGGT
CGTCAGTTTA CAACAACTAT TAAAGGCGAA GATGAGCCGA ACTCTGGTGT CTTCCTTGTA
GAAGTAGAAT CACCAAATGG TTTAGTCACT CCAGTGGTAT CCATTGGTGT AACAATTCTA
TAA
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| Protein sequence | MRSAYKVYFA LLCSFFLVAC GGGGSITDDG TGGGTTPDPT ISISLSIDND QVSVAEPAVI
TATVKDSTGA AVSTLVSFTL NNDDYGTFSP STGEVVTNSS GVATIQLNTA EINTGATVTA
TTTSGESAAL FVTMTGDGGV AGGGAQVSLV LTDAAGNAIQ SISTLSPGKL TATVTGITRS
SIVTFESPIG DLPVKTAVTN AQGKATVDIY AGSSLGAGEA TATLSTNETG STIVVVGATN
VVMGSGTPFV EGVAAISATD LSAGGTATVT VSIQDDLGNA FTQPVDVNFS STCATKIPAQ
AVISSPVSSS NGVATSTYRA EGCVGEDQIN VTANAGGISL SAVGTINILQ ADVGSIVFVS
AVPENISILG TGGTESSVVK FKVLDKNGNV VANQNVKFAL NTTVGGVKID PLQATTDNSG
IVQTVVTTGT VATSLRVTAT VDNGAIPTIS SQSSQLIVST GIPDQDSFSL AATILNPEGW
NVDGTEVTVT ARMADAFNNP VPDGTTVSFT TEGGSIEDAC QTLNGACSVV WTSQLPRPEG
QIILNGAGQM YRNPNAALAY DATLDLYGNI YGQKYGGRAT VTATAIGEES FPDLNGNGRF
DASEANTFLT GTDVTGQSFD LNDAYNDYNE DGLFNPQQTG GQAGGTLEEL IDFNSNGIFD
VKDGKYNGVL CSDPVHSACA DGVSDSKSLF VRRSLTLVMS GSTAYATAPA DIVVDDSTGI
HSGASSMVIV GKGSATATFT ISDLHNQQMP AGSIVRFTTS AGSVVSSSEY TWPSTNYNGG
RQFTTTIKGE DEPNSGVFLV EVESPNGLVT PVVSIGVTIL
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