| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2469 |
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| Symbol | |
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| ID | 4279380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2941840 |
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| End bp | 2942733 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135265 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_751152 |
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| Protein GI | 114563639 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.101022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACT CGCTTAAACA AATTACCGTT TTTGATGCTG TGGCCAGTCT TGAAAGTGTG
AGCGCAGCTG CTAGAAAGTT ATCGATGACC CAATCAGCGG TGAGTATGTC ACTTTCTCAG
CTAGAGAATT TACTAGACCG TCCGCTGTTT ATTAGACAGG GCAACCGACT AACCCTGAGC
CATTGGGGTA ATTGGTTAAG ACCCAAAGCA CGCCAATTAC TTCAAGATGC ACAACAAATT
CAATTTGGTT TACATGAACA ACACGTAATT AGTGGTCAAT TTAAGTTGTG TTCAAGCCAA
ACTGCGGCCG AATATTTATT GCCGAACTTA ATCAGTAAAA TTGATAATGA TTTTCCAGAG
CTAAGGATTG ATCTTGAGGT TGAAAACACC GAACACGTTG TTGAAGGCTT AATAAACTAC
GACTATGACC TTGGTATTAT TGAGGGGCGT AACGACGATA GCCGCTTACA TCAAGAGAAG
TGGATTGACG ACCATCTTGT GGTGGTTGCT GCACCACATC ACCCTTATGC CAATGCTGAA
AAAATTAGTT TAGCGCAATT GGAACAAGCA AAATGGGTAC TTAGAGAGCA AGGTGCTGGT
ACTAGGCGTA TTTTTGAGGG CGCTATCCAC GGTGTGCTTG AAAAGCTCAA TGTGTGGAAA
GAATACGAAC ATGTACTGCT GTTAAAGGCA TTAGTCAGAA ATGGGGCTTA CTTAAGCTGC
CTGCCCCATA TTACCGTAGA GCAAGATGTT GCTGAAGGTA AGCTGGTTAT TATTGATACA
CCACAGCTTA ACCTACAGCG TCAATTGTCT TTTGTATGGC GTAATGATGC GGGTGATAAC
CCGCTGCGTG ATTGCGTCCT AAATGAAGCA AGACGCATGA GTAAAACGCT TTAA
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| Protein sequence | MKYSLKQITV FDAVASLESV SAAARKLSMT QSAVSMSLSQ LENLLDRPLF IRQGNRLTLS
HWGNWLRPKA RQLLQDAQQI QFGLHEQHVI SGQFKLCSSQ TAAEYLLPNL ISKIDNDFPE
LRIDLEVENT EHVVEGLINY DYDLGIIEGR NDDSRLHQEK WIDDHLVVVA APHHPYANAE
KISLAQLEQA KWVLREQGAG TRRIFEGAIH GVLEKLNVWK EYEHVLLLKA LVRNGAYLSC
LPHITVEQDV AEGKLVIIDT PQLNLQRQLS FVWRNDAGDN PLRDCVLNEA RRMSKTL
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