| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2463 |
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| Symbol | |
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| ID | 4279374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2930638 |
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| End bp | 2934072 |
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| Gene Length | 3435 bp |
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| Protein Length | 1144 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135259 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_751146 |
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| Protein GI | 114563633 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000141924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTAA AACAAATAAA ACTTGCTGGA TTTAAGTCGT TTGTAGACCC AACTAAAATC
CCATTTGATA ACGCCTTATC AGCGATTATT GGCCCTAACG GCTGCGGAAA ATCCAATGTG
ATTGATGCCG TACGCTGGGT GCTGGGTGAA AGTTCGGCAA AGCATTTACG TGGCGATTCG
ATGACCGACG TTATTTTTAA CGGTTCATCG GCACGCAAAC CCATTTCTGT TGCGGGTGTC
GAACTGGTAT TCGAGAACAT TCAGGGAAGG CTCACTGGTC AATATGCCAG TTATCAAGAG
ATCTCGGTTA AGCGACAAGT TAACCGCGAC AGTGAATCAA GCTATTTCCT CAATGGTCAA
AAATGTCGTC GAAAAGACAT TACCGACTTA TTTATGGGGA CGGGTCTTGG GCCGCGTAGT
TATGCCATTA TCGAGCAAGG TACTATTTCA CGCTTAATCG AATCTAAACC TCAAGAGTTA
AGAGTGTTTA TTGAGGAAGC AGCAGGTATT TCGCGTTATA AAGAACGCCG CCGAGAAACC
GAAAATCGTA TTCGTCATAC CCGTGAAAAC CTCGAACGTT TAAATGATAT TCGAGTTGAA
CTCGGTGCCC AATTAGACAA GCTATCGCAA CAAGCTAAAG CCGCTCTGCA GTACCGAGAA
TTAAAAAATA GTGAACGAGA GTTGCATAGC CAGCTATTAG TGATGCGCTA TCAGCAATTG
TTGCAGCAAA CAGACAGACT TGATGCTGAA ACGGCCGAAG GTGAGCTTAA ATCTGAAGCG
TTAGCCAAAA CCGCACAGCA GGGCGACACC AGTGTTATTC AACTTAAACA GCAATTGGCT
GAGCTCAGTG ATGCTGAACA TAAACTGGTA GAGCAATATT ACCAAGCCGG TAATACCATG
ACCAAGCTTG AGCAACAGCT TGCTCATCAG CAACAGCAAG ACTCTCAGCT GCAGCAACAA
ATTCAAGTAT TACAACAGCA AATCAAACAA GCTGACGATA ATATTGTCAG CATGACCGAT
GTTCATCAAC GATTGGTTGC GCAATCAGAT ACTCATCAAC CCGCTTATGA ACAGGCGAAT
ATTGTGCTTG AGCAAATCGA TGAGCAAGTT TTTGCTATCG AAGAAGCGTG TGATGATCAG
CAGCAACAAG TAACCCAATA TGCTGAAATC TTAGCGACTC ATAAAATGCA GTTGGCACTG
AGCCAATCGA CGCTCAGCCA TCAACAGCAA AGTTTGGTTC AAAACGAACA GTACTTAGCT
CAATTACAAA CAGAGTTAGC TGCTTTAGCT CAGCAAGACA ACCAACAGCA GTTGCACAAC
AGCACGGCAG AATTAGCTAA TGTTGAACAA CAACTAAATG ATAAACAGCT GCAGCATAGT
CAACTTGAGC TTTCCTTACT TGAGCAGCAA CAAGCCGTCA CTGAAGCGAG TGATGCTTAT
CAAACCCTAA AGCAAACTGT CACTCGCCAT CACTCTCGAT TGCAATTTAT TGATGAGTTG
CTGGCTGATC ACACTCAAGA TGATGGCCAA CAATTGTGGC AAGTTATTGA GGTTGTGCCT
GGTTGGGAGA AAGCGGTCGA TAAAGTGTTA CAAGGCTTAA GTCAATTACC TGTTCTAGGG
TTGGGTCAAA CATCTTCATT GAGCGTTTCT CCGCCTACAG TGGGTTTTGA GCCACAGCAT
CAAGTGACGT ATCCTGCTTT AACAACCCCA GTTAATTTAA CGCCATGGTT ACAACATGTT
GTGTGGGCGT CCAGTCTCAG TGAAGCAAAG GAGTTATTAC CAACATTGCT TCCTGAGCAA
TATATTGCCA CTCAAGAAGG TTACTTGATA GGCAATGGTT TTGTGCTCAA TCATACTCAG
GCAGGGCAAT CCGCTATTGT ACTGAGCCAA GAACGAACAA GCTTAAGTCA GCAATTAATA
GAACTTGAGC AACAACTGCT ATTGTCTCAG CAATCTCTGA CTTCGTTAAC TCAACGGGCT
GCGACCACTC AGGTAGAGCT GAATCAATGC CAACAGGCTT GTCATCAGTT GCAAATAGAG
CAGACAAAAC TGCACTCTTT GGTGACAAGT TTAACTCAAC AAGCCGTTGA GAAACGCGAT
AAACAACAGC AATGCAGCCA ATCAATCGCC AAGCTTGAAC AGCAAATTGG TGATAAAAAA
ATGCATGTCG ATGCCCTTGA AGAACAAGTG TTGACGCAAG AAGATGCATT ATTGCAAGCG
ATGAACCAAC ACGATGTTGC TCAACAAGCT TGGCAAACAA GCCAAGCCAA GCTGCGTGAA
ACCAAAGTTG TTCGCACCGA TGCTGCAAAT AGCGTTAAGC AGCTGCAAGC ACAAGTGCAG
CAACATGCTA CCCAGCAAGC ATTGAGTGAA CAAAAATTAA AGCAACAACA TGAAAAACAG
ACAGAATTAG TCAGTCAATT GACTCAGTTA CAACAAATGT TGCTCGACAA TCAGCAACAA
CAAGGTCAAC ATGATTTAAG TCAATTATCA ACACAGCTGG CGCAAGCACT CGAGCAGCAA
CAAGCATTAC AGCAGCAATT ACAGCAAAAT CGGTCTCAAC AAGCAGAGCT TCAAACCAGT
TTAGACCGTT TAGTATTGAT GCAAAAACAA CAGCTTGTAG TGTTACAAGA CTTGACTCAA
AAGATAAGCA CGTTAAAGTT ACGTCGTGAG GGCTTAAAAG GGCAGGCTAA TGGGCAGCTG
CAATTGCTGC AAGAACAGCA AATTCAGCTA CAACAGGTCA TTGCCGACAT ACCGGAACAT
GCATCTGTTG ATGTTTGGTC GCAACAGCTT GAAAAAGTAA AACAGAACAT TATACGTTTA
GGTGCTATCA ACCTTGCAGC CATTGAAGAA TTTGAATCGC AACGAGAGCG AAAAGCTTAT
TTAGACAGTC AAGATGACGA CCTAAATAAA GGCTTAGCGA TTTTAGAAGA CGCTATCCGT
AAGATAGATA AAGAAACCCG AAGCCGTTTT AAAGCCACAT TCGAAACGGT AAACCATGAT
TTAGGGCTGC TATTTCCTAA AGTTTTTGGT GGAGGAAGGG CTTATTTGGC ATTAACCGGT
GATGACCTGC TTGAAACGGG TGTTACTATT ATGGCGCAAC CGCCAGGTAA GAAGAATAGC
ACCATACATT TACTTAGTGG TGGAGAAAAA GCGTTAACCG CTTTATCATT AGTCTTTGCC
ATTTTTAGAC TGAATCCAGC ACCTTTTTGT ATGCTAGATG AAGTAGATGC ACCTTTGGAT
GACGCCAACG TCGAACGTTT TTGTCGGTTA CTGAAAGAAA TGTCACAGAG TGTGCAATTT
ATTTATATCA GTCATAATAA AATAACAATG GAAATGGCCG ATCAACTTAT TGGCGTTACT
ATGCATGAAC CAGGCGTTTC AAGAATAGTC GCAGTGGACA TTGAAGCCGC CGTCGCCATG
GCAGACGCGG TATAA
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| Protein sequence | MRLKQIKLAG FKSFVDPTKI PFDNALSAII GPNGCGKSNV IDAVRWVLGE SSAKHLRGDS
MTDVIFNGSS ARKPISVAGV ELVFENIQGR LTGQYASYQE ISVKRQVNRD SESSYFLNGQ
KCRRKDITDL FMGTGLGPRS YAIIEQGTIS RLIESKPQEL RVFIEEAAGI SRYKERRRET
ENRIRHTREN LERLNDIRVE LGAQLDKLSQ QAKAALQYRE LKNSERELHS QLLVMRYQQL
LQQTDRLDAE TAEGELKSEA LAKTAQQGDT SVIQLKQQLA ELSDAEHKLV EQYYQAGNTM
TKLEQQLAHQ QQQDSQLQQQ IQVLQQQIKQ ADDNIVSMTD VHQRLVAQSD THQPAYEQAN
IVLEQIDEQV FAIEEACDDQ QQQVTQYAEI LATHKMQLAL SQSTLSHQQQ SLVQNEQYLA
QLQTELAALA QQDNQQQLHN STAELANVEQ QLNDKQLQHS QLELSLLEQQ QAVTEASDAY
QTLKQTVTRH HSRLQFIDEL LADHTQDDGQ QLWQVIEVVP GWEKAVDKVL QGLSQLPVLG
LGQTSSLSVS PPTVGFEPQH QVTYPALTTP VNLTPWLQHV VWASSLSEAK ELLPTLLPEQ
YIATQEGYLI GNGFVLNHTQ AGQSAIVLSQ ERTSLSQQLI ELEQQLLLSQ QSLTSLTQRA
ATTQVELNQC QQACHQLQIE QTKLHSLVTS LTQQAVEKRD KQQQCSQSIA KLEQQIGDKK
MHVDALEEQV LTQEDALLQA MNQHDVAQQA WQTSQAKLRE TKVVRTDAAN SVKQLQAQVQ
QHATQQALSE QKLKQQHEKQ TELVSQLTQL QQMLLDNQQQ QGQHDLSQLS TQLAQALEQQ
QALQQQLQQN RSQQAELQTS LDRLVLMQKQ QLVVLQDLTQ KISTLKLRRE GLKGQANGQL
QLLQEQQIQL QQVIADIPEH ASVDVWSQQL EKVKQNIIRL GAINLAAIEE FESQRERKAY
LDSQDDDLNK GLAILEDAIR KIDKETRSRF KATFETVNHD LGLLFPKVFG GGRAYLALTG
DDLLETGVTI MAQPPGKKNS TIHLLSGGEK ALTALSLVFA IFRLNPAPFC MLDEVDAPLD
DANVERFCRL LKEMSQSVQF IYISHNKITM EMADQLIGVT MHEPGVSRIV AVDIEAAVAM
ADAV
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