| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2452 |
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| Symbol | |
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| ID | 4279363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2920116 |
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| End bp | 2921444 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135248 |
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| Product | exonuclease subunit SbcD |
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| Protein accession | YP_751135 |
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| Protein GI | 114563622 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTA TTCACACATC AGATTGGCAC CTTGGCCAAT ATTTTTATGG TAAAAGTCGC
GCAGCTGAGC ATCAGGCTTT TATGCAGTGG TTACTTGAAC AAATAAACAT TCACCAGGTT
GATGCGCTTA TTGTCGCTGG CGATATTTTC GATACTGGCA CACCGCCAAG TTATGCCCGT
ACGCTATATA ATCAATTTAT TGTCCAAATT CAGCAAACAG GTTGCCAGCT AATTTTATTG
GGTGGTAATC ACGATTCTGT GTCGACGTTG AATGAATCTA AACATCTCCT TGCCTGCCTA
AATACTGTGG TTATCCCTGG TGCGCTAGAG CATTTTGAAG AGCATGTATT TACCCTCAAA
AATCGCCAAG GTGAAGCGGG TGCTATTTTA TGTGGTTTAC CCTTTTTACG CCCGCGTGAT
GTGGTGCTAA GTGAATCAGG TGAGTCATCA ATTGATAAAC AACGCAAATT AGGTGATGCC
ATTAGTGAGT TATATCAGCG CTGTTTTGAG CAAGCTGAAC AACTCAATAA TACCTTTACC
ACGCCAGTAC CCATTATTGC GACAGGTCAT TTAACCACAG TGGGTGCAAG CACCTCAGAA
TCCGTGCGTG ATATTTATAT AGGCAGTTTA GATGCTTTTA ATGCGGCGCT GTTTCCTGCC
GCAGACTACA TTGCATTAGG TCATATTCAT CGGCCTCAAG TGGTGGCAAA ATCTGAACAT
ATTCGTTACA GCGGTTCACC AATAGCGTTA AGTTTTGATG AACTCGCGGC AGATAATACC
ACTAATAAAT CGGTATTCTT GGTCGAATTT AGTGATGCCA AATTATCTCA AATCACACCA
TTAATGGTGC CTGTTTTCCA GCCGATGCAG GTGTTAAAAG GCGACTTAGA TAGCATTGAG
CAGCAGATAA GCACATTTGC ATTGCAAGCA GAATCCGCAA AAACGACTTG GTTGAGCATT
GAAGTGTCAC AACAAGATTA TTTGTCTGAT TTGCAATCGC GCATTGCCGA CATGACTCAA
GACAAAGCGG TTGAAGTATT GCAGTTAAAG CGTGCCCGCA GTCAACGACA GCAACACATT
AAGCAGCTAG ATAATGAAAC TTTATCTGAG CTCAGTGTCG ACGAAGTATT TGGGCGACGT
TTGTCGCAAG AAGAGTTTGA GAGTGAATCG CAACAGGCAC AGTTAGGGCG AATAAAGCAA
CGCTTTAGCC AAGTGTATGC CGAGGTGGAG TCTGAGCGAA ACAGTCAAGA AACGGCCGCG
AGCCATGTGT TACAAGAAAC CTCGATAGAA GCCGTTGCTA CAAAAAGTGC AACAGAGGGT
GAGCAATAA
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| Protein sequence | MRIIHTSDWH LGQYFYGKSR AAEHQAFMQW LLEQINIHQV DALIVAGDIF DTGTPPSYAR
TLYNQFIVQI QQTGCQLILL GGNHDSVSTL NESKHLLACL NTVVIPGALE HFEEHVFTLK
NRQGEAGAIL CGLPFLRPRD VVLSESGESS IDKQRKLGDA ISELYQRCFE QAEQLNNTFT
TPVPIIATGH LTTVGASTSE SVRDIYIGSL DAFNAALFPA ADYIALGHIH RPQVVAKSEH
IRYSGSPIAL SFDELAADNT TNKSVFLVEF SDAKLSQITP LMVPVFQPMQ VLKGDLDSIE
QQISTFALQA ESAKTTWLSI EVSQQDYLSD LQSRIADMTQ DKAVEVLQLK RARSQRQQHI
KQLDNETLSE LSVDEVFGRR LSQEEFESES QQAQLGRIKQ RFSQVYAEVE SERNSQETAA
SHVLQETSIE AVATKSATEG EQ
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