| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2451 |
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| Symbol | |
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| ID | 4279362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2916418 |
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| End bp | 2920116 |
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| Gene Length | 3699 bp |
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| Protein Length | 1232 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135247 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_751134 |
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| Protein GI | 114563621 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC TAAGCCTTCG CTTTAAAAAT ATTAACTCAC TTAAAAATGA GTGGAAAATC
GACTTCACCC AATCGCCATT TGCTGAAAAC GGTTTATTTG CTATCACAGG TCCTACTGGC
TCAGGTAAAA CAACCATTCT CGATGCGATT TGTTTAGCGC TTTACCATCG TACTCCGCGG
TTAAGTAATA TTTCTAAAAC CACCAACGAG TTAATGACTC GTGGCACCGC AGAATGTTTG
GCTGAAGTTG AATTTGAAGT TAAAGGTGTC GCTTATCGCG CTTTTTGGAG CCAGCGCCGT
TCGCGCGATA AAGCCGATGG CAATTTACAA GATGCTCAAG TCGAGTTGGC AAAATTGAGT
GACGGTAAAA TTCTTGCCAG CCAGATAAAA CGCAAAACCG AGTTAATTGA AGAAATCACC
GGGCTCGACT TTGCTCGTTT CACTAAATCA ATGATGTTGT CACAAGGCCA GTTTGCCGCT
TTTTTAAATG CCGAAGCCAA TGAGCGTGCA GAGCTATTGG AAGAGCTAAC CGGTACTGAA
ATTTACAGCT TAATTTCAGC GCGAGTACAT CAGCATTTTT CTGATGCCAA AACGAACTTG
AAGGTACTTG AAGCTAAGCT TGGCAGTGTT GAGTTATTTG ATGAACAACA AGTTGTGGCG
CAGCAACTAC AGATTGAACA ACTCAATCAG GCGCTCGTGA TCGATCAACA GCAATTAGCT
CAATTAAGCC AATTTATAAC CTGGGCAGAC AATACTGAGC AATCGCAGCA GACATTAGTT
AACATTCAGG CTCAACAGCA ACAAGCACTG TCTAGCGTAC AGCAACATAG CGATGAACTA
ACTCGACTTG AACATAGTGA GCCAGCACAG CAAATCCAGC CTCTATTTGA ACAGCAACAA
AAAGCCCAGT TAAGCACCCG AGTATTATCG GAACAGATTG AACAGTTAAC GGAACAAGTT
AGTGTAGCTG AACAAACACT GCGACAGCAC ACCCACAAGC AAACGCAAGC TAAGCAAAGC
GTTGATAAAA CCAACCAAGC ACACAAAGAT TTACTTAATC TTATCGACAA ACAGGTGTTG
CCGTTAGACC AACACATTAG CCAATTGAAC TATCAATTGT CTCAGGTCAT ATTAAGCCAT
CAGCAAACGG CTGAGCAACA ACACAAAACG ATTGAGCAAC AGCAACAGTT GATGGCATTG
CAACAACAAC TCTCGTCTGC AAAGCAGGAT ATACAGCAAC AACTTGATAA TTTGCCGCAA
GGCCAAGAAG TGGCGAAAAA GTTTGCGGCT TGGCAGACAC AATACAGCCA AGTATTGCAA
TTAAACCAGC AGTTGAGCCA ACTTGACACT CAACGAGTTC AGCAACAACA CAATATCGAG
CAAACTCAAA CAACGTTAAC TGAACTTTCG CCACAAATTA AGCTTGCCAA AACGACGGTC
ACCCAAGCGT TAGCTCAACA AGCCGACAGC CAGCAAGCAA TAACGACATT ATTGGCTGGC
CAAGACGAAA ATCAGATTAA TCATGATTAC CAACAACTGG TCGAGCAACA AGCTGGGCGT
TATCAGTTAA CTCAGCTATT TAGTCACTTT GTGCGTCAGC AGCAACAATG CCAACAATTA
AGCAGTCAAT CGGTGCAATT TAACACTGAT TTACAGGCCC TAGCGCAGTC ACTTTCGCTG
GTAAGAACCC AGTGGAGTGA AAAAAATCAG CAAGTAAAAG ATCTGCAAAC CATACTGCAG
CAAGAACAGC AAATTGCCAA TTTAACCTTA GAGCGCGCCA AGCTTAAAGC CGGTGAACCT
TGTGCATTGT GCGGTTCGAC AGATCACCCG TTAGTTGAGC GTTATGAAGC ATTGAATGTG
TCTGTTACCG AACAAAGAAT GCAGCAACTA CAAATTGAAC TTGATGCGAT TAAACAGCAA
GGTGAGCAGC TTAAAAATCA ACAAACGGCG TTGCAAGTTA ACTACGACAA CTCGCTCATG
CAATTGAGCC AAGCGCAAAC TGAATTACAA ACAACTGAGC AACAGTGGCA ACAACACACT
CAGGCGCTTG CGGTAACGTT TGAATTACAT GAGCAGCAAC AACATAAGTT AACTGATTAT
ATTGCCCAGT CAGAAGCCAA ACAGCAGCAA CTTGCCCAAA CGATAAGTCA GCTTAACCAA
TGCCAAAAAA CCTTACATCA ACATCAGCAC AATGCTACCC AAGCAGAACA AGCGTTGGCA
GTGTTGGTTA ATCAGCAAGG GTTATTGCAA CAGCAACTTG ATAATTTATC CCAAGGTTTA
GTGAGTCAGC AGCAGCAAAT TGAATCTATT AACAAGCAAC TGCAGCAACT TAACAGCGCA
CTGGATGCAC ACATTATTGC TACAGGGTTA ACACCGCCGA CGCTAGAGAA TGCCGACACT
TGGCTTCATC ATTTACAACA ACAACTTGAA CGTTGGGTTG CAGCGCAGCA GCAGGCTATT
GATAACCAGC AGCAGCTCAG TGTCACCGCT GAAAAACTCA CCGCAAACAA TCTGCACTCC
ACTGAAATGG CAACCAAGCT AGCAGAAGTG ACCGAGCAAG TGGTTACGCT TAACGAACAA
CTCGATGCGG TACTCGCACA GCGTAAAGCC GTGTTTGGAG ACAAAATAGT TGAAGATGAA
AAGCTGTTTA GCCAACACGC AGTAGATCAA GCTCAACAGG TATTTGTCTC AATTCAACAA
CAATTGCAAA CGGCGGATAA ACATTTTGCT GGCTTACAAG CGCAGCTGCA ATCGACAACA
CAACAAGTAA CTAAGGCTAA TCAAGAGTTA CAGCAGTTGC AGGCCAAATG GCAAATGGCA
TTACAATCAA GTCCATTTAC AGATCAACAG TCATTTGAGC AAGCCTTATT GACGCCAAAA
GAGCGTCACA CCTTACAGCA ACTAAAACAG CAGCTGGATA ACGATATTGT TAAAGCCAAT
ACGTTAGTTG AACAAGCCAA AATAAAACAA ACGGAGTTAG CGCAGCAGGC AGAGCAACAC
GGATACGATA TTGCTCAACA CGGCAATATA ATGCTGCAAC ATCAAACGAT GGAAGCTAAG
CACCAACAAG ACAAGCAAAC ACTGTGGCGC TTAAGTCATG AGTTAGAGCA AGATACCAAT
AAGCGGGCAG GGCAACAGCA ACTGTTAGCG GAACAAGCCC AAATACAACA AGATTACGAC
GATCTTGCGT ACCTGCATTC GTTAATTGGC TCACAAAAAG GCGATAAGTT CCGTAAGTTT
GCTCAAGGGC TTACTTTAGA CCATTTAGTG GCATTAGCGA ACAGGCAGCT GGAACGTTTG
CAAGGCCGGT ACTTACTTGA ACGCAAAGAG TCCGATGCGT TAGAGCTACA AGTGCTCGAT
ACCTGGCAAG GTGATGCTGT GCGAGACACC CGAACCTTGT CGGGCGGTGA AAGCTTTTTA
GTGAGTTTAG CCCTTGCGCT CGCATTATCT GACCTTGTTA GTCATAAAAC GAGCATTGAC
TCACTGTTTT TAGATGAAGG CTTTGGTACG TTGGACAGTC AAACGTTAGA TACCGCTTTA
GACGCATTAG ATAATTTAAA TGCGTCGGGC AAAATGATTG GTGTAATTAG CCATATTGAA
GCCATGAAAG AGCGGATCGA CGTACAGATA AAAGTGACTA AAATGAATGG CCTTGGTATT
AGTAAATTGC AGGGTGAGTT TGCTGTAAGT GGGTCTTGA
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| Protein sequence | MKILSLRFKN INSLKNEWKI DFTQSPFAEN GLFAITGPTG SGKTTILDAI CLALYHRTPR
LSNISKTTNE LMTRGTAECL AEVEFEVKGV AYRAFWSQRR SRDKADGNLQ DAQVELAKLS
DGKILASQIK RKTELIEEIT GLDFARFTKS MMLSQGQFAA FLNAEANERA ELLEELTGTE
IYSLISARVH QHFSDAKTNL KVLEAKLGSV ELFDEQQVVA QQLQIEQLNQ ALVIDQQQLA
QLSQFITWAD NTEQSQQTLV NIQAQQQQAL SSVQQHSDEL TRLEHSEPAQ QIQPLFEQQQ
KAQLSTRVLS EQIEQLTEQV SVAEQTLRQH THKQTQAKQS VDKTNQAHKD LLNLIDKQVL
PLDQHISQLN YQLSQVILSH QQTAEQQHKT IEQQQQLMAL QQQLSSAKQD IQQQLDNLPQ
GQEVAKKFAA WQTQYSQVLQ LNQQLSQLDT QRVQQQHNIE QTQTTLTELS PQIKLAKTTV
TQALAQQADS QQAITTLLAG QDENQINHDY QQLVEQQAGR YQLTQLFSHF VRQQQQCQQL
SSQSVQFNTD LQALAQSLSL VRTQWSEKNQ QVKDLQTILQ QEQQIANLTL ERAKLKAGEP
CALCGSTDHP LVERYEALNV SVTEQRMQQL QIELDAIKQQ GEQLKNQQTA LQVNYDNSLM
QLSQAQTELQ TTEQQWQQHT QALAVTFELH EQQQHKLTDY IAQSEAKQQQ LAQTISQLNQ
CQKTLHQHQH NATQAEQALA VLVNQQGLLQ QQLDNLSQGL VSQQQQIESI NKQLQQLNSA
LDAHIIATGL TPPTLENADT WLHHLQQQLE RWVAAQQQAI DNQQQLSVTA EKLTANNLHS
TEMATKLAEV TEQVVTLNEQ LDAVLAQRKA VFGDKIVEDE KLFSQHAVDQ AQQVFVSIQQ
QLQTADKHFA GLQAQLQSTT QQVTKANQEL QQLQAKWQMA LQSSPFTDQQ SFEQALLTPK
ERHTLQQLKQ QLDNDIVKAN TLVEQAKIKQ TELAQQAEQH GYDIAQHGNI MLQHQTMEAK
HQQDKQTLWR LSHELEQDTN KRAGQQQLLA EQAQIQQDYD DLAYLHSLIG SQKGDKFRKF
AQGLTLDHLV ALANRQLERL QGRYLLERKE SDALELQVLD TWQGDAVRDT RTLSGGESFL
VSLALALALS DLVSHKTSID SLFLDEGFGT LDSQTLDTAL DALDNLNASG KMIGVISHIE
AMKERIDVQI KVTKMNGLGI SKLQGEFAVS GS
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