Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2450 |
Symbol | |
ID | 4279361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2914819 |
End bp | 2916105 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135246 |
Product | peptidase M23B |
Protein accession | YP_751133 |
Protein GI | 114563620 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAA TTATGGGCTT CCAAAGGCCA GCGGTAAGTC AAGTGAACTT GCCAAACTTG CACAAGAAAA TCTTGCTAGC AAGTGTGTTT GTTGTTGGTG CTGCTTTATT ATGGCCAACA CAACAAGAGT TTTCATCACA ACGTATTCCA GTGGCAATCG ATATCGATTC GTTATTGCCA CACATAGCTC AACAAGAAAC TACGTTGAAG CTTGTAAAGC CTATCTCACC GATTTTAGAT CGCGTGATCG AAAGTGGTGA TACCTTAAGT CATTTATTTG AGTTAGCTGG TATCGACCAA CGAACCATGT ATAAAGTACT TGAAGCTGAT TTAGAAGTAT TAGCATTAGA TACACTGCTG CCGGGTAACC GCATCCAATT TTGGGACAAT GCCAATGGTG AACTTGATAA GCTAGAGCTG TACTTTAACC CTGCTCACCA AGTGGTATTC ACCCGTTTTA AAGACGGAAC TTACGGTGTT AATGACATTA ACATCGATGG CATTTGGCAA AATCGCATCG TTGGCGGTGA AATTAATGGC TCTTTCTATG TGTCGGCTAA AAATGCTGGT TTAAGTGCAG CCGAAATTCA AAAAGTCGAA TCACTGTTAA AATCCAAATT AAACTTTTCT CGTGAGCTAC ATGCTGGTGA TACTTTTTCG GTGTTAGTTA ACGATCAATT TGTTGAAGGC GAACCAACAG GTATCACATC GATAGAAGGT ATTCGCATTA ACACCGGCCG TCGCGACGTT ACAGCTTTCC AAAATATTGA TGGCAACTAT TACGACATTC AAGGTCAAAG TTTAACTCCA GCCTTCCAAC GTATTCCGCT AAATAGAAAA GTCCGCTTGA GTTCTCGATT TAACCCTTAT CGCAAACACC CCATTACAGG TCGCGTTCGT CCTCACAATG GTACCGACTT TGCTACGCCT ATTGGGACTC AAGTCGTGGC TCCTGGTGAT GGCGTGGTGA CGTTAGTGAC TAAACATGCT TTTGCGGGTA ATTACATTGT GATTGATCAC GATAATAAAG TGCGTACTCG TTACCTGCAT TTATCGAGGT TTTTAGTTAA AAGAGGTCAG CGTGTCACTC GTGGTCAAGT GATTGGCTTA TCGGGCAATA CTGGTGCTTC CACAGGCCCA CATTTGCATT ATGAGTTCAT TGTTAATGGT CGCCCAATTG ACGCAATGAA AGCCAATATT GCAGAAGCTA AAGTCTTACC TAAAAAGCAA TTACAAGCGT TTCAAGCTTT GGTACGTAGC CGCAGCATGA TGATGGACTT AGGCTAA
|
Protein sequence | MSKIMGFQRP AVSQVNLPNL HKKILLASVF VVGAALLWPT QQEFSSQRIP VAIDIDSLLP HIAQQETTLK LVKPISPILD RVIESGDTLS HLFELAGIDQ RTMYKVLEAD LEVLALDTLL PGNRIQFWDN ANGELDKLEL YFNPAHQVVF TRFKDGTYGV NDINIDGIWQ NRIVGGEING SFYVSAKNAG LSAAEIQKVE SLLKSKLNFS RELHAGDTFS VLVNDQFVEG EPTGITSIEG IRINTGRRDV TAFQNIDGNY YDIQGQSLTP AFQRIPLNRK VRLSSRFNPY RKHPITGRVR PHNGTDFATP IGTQVVAPGD GVVTLVTKHA FAGNYIVIDH DNKVRTRYLH LSRFLVKRGQ RVTRGQVIGL SGNTGASTGP HLHYEFIVNG RPIDAMKANI AEAKVLPKKQ LQAFQALVRS RSMMMDLG
|
| |